Table 2. Abundance of 250 types of tandem repeat in DNA libraries.
Types of tandem repeat, number | Abundance, RPM1 | ||||
---|---|---|---|---|---|
LLLC | LD | Lh1 | Lh2 | ||
LLLC> Lh: 204 | 158* | 53193 | 43612 | 34469 | 36318 |
46# | 10221 | 8341 | 3635 | 3859 | |
LLLC< Lh: 46 | 39¤ | 17827 | 15726 | 28777 | 30996 |
7£ | 431 | 504 | 1502 | 1489 | |
Total | 250 | 81674 | 68186 | 38104 | 40176 |
*repeat types, whose abundance was 1.5-2-fold raised during LLC development and dropped after DNAse I treatment
#repeat types, whose abundance was 2.5-3-fold raised during LLC development and dropped after DNAse I treatment
¤repeat types, whose abundance was 1.5-2-fold decreased during LLC development and further declining after DNAse I treatment
£repeat types, whose abundance was 3-fold decreased during LLC development and increased after DNAse I treatment
1RPM—reads per million reads in library