Table 1.
Primer sequences
| Plasmid Construction
|
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| Construct | Primer Sequences | Restriction sites | Vector | |||
| pSRα-HA-TIA-1 | 5′-CACAGAATTCATGGAGGACGAGATG-3′ | EcoRI | pSRα-HA | |||
| 5′-TATATAGTCGACTCACTGGGTTTCATAC-3′ | SalI | |||||
| pSRα-HA-RRM | 5′-CACAGAATTCATGGAGGACGAGATG-3′ | EcoRI | pSRα-HA | |||
| 5′-TATATAGTCGACTCATAGTTGTTCTGTTAGC-3′ | SalI | |||||
| pSRα-HA-PRD | 5′-CACAGAATTCATGCGTCAGACTTTTTC-3′ | EcoRI | pSRα-HA | |||
| 5′-TATATAGTCGACTCACTGGGTTTCATAC-3′ | SalI | |||||
| pSRα-HA-Sup35NM | 5′-CACAGAATTCATGTCGGATTCAAACC-3′ | EcoRI | pSRα-HA | |||
| 5′-TATATAGTCGACTCACAAATTGTTATTGTAGTTG-3′ | SalI | |||||
| pSRα-HA-RRM/NM | 5′-CACAGAATTCATGGAGGACGAGATG-3′ | EcoRI | pSRα-HA | |||
| 5′-TATATCTAGATAGTTGTTCTGTTAGC-3′ | XbaI | |||||
| 5′-TATATCTAGAATGTCGGATTCAAACC-3′ | XbaI | |||||
| 5′-TATATAGTCGACTCACAAATTGTTATTGTAGTTG-3′ | blunt | |||||
| pcDNA3-FLAG-HSP70 | 5′-CTCTCGGATCCGCCAAGAACACGGCGATC-3′ | BamHI | pcDNA3-FLAG | |||
| 5′-CACACGAATTCCTAATCCACCTCCTCGAT-3′ | EcoRI | |||||
| pcDNA3-FLAG-HSC70 | 5′-CTCTCGGATCCAAGGGACCTGCAGTTGGC-3′ | BamHI | pcDNA3-FLAG | |||
| 5′-CACACGAATTCTTAATCCACCTCTTCAAT-3′ | EcoRI | |||||
| Digoxygenin-labeled DNA probes
|
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| Probe | Primer sequence | Fragment size | Template | |||
| HSP27 | 5′-GTCAAGACCAAGGATG-3′ | 229 bases | pcDNA3-HSP27 | |||
| 5′-GACTCGAAGGTGACTG-3′ | ||||||
| HSP70 gene 2 UTR | 5′-AAGTGGACTGTTGGGACTCAAGGACTTTG-3′ | 239 bases | Heat shocked | |||
| 5′-CAAACAAACTCGTACAGAAGGTG-3′ | COS7 cDNA | |||||
| RT-PCR analysis
|
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| Primer sequence | ||||||
| HSP70 coding region | 5′-ATAACGGCTAGCCTGAGGA-3′ | |||||
| 5′-GTCCGACTGCACCACCGGG-3′ | ||||||
| HSP70 gene 1 UTR | 5′-GAGCTTCAAGACTTTGCATTTCTTAG-3′ | |||||
| 5′-GGGCATCACTTGAATTTTAAAG-3′ | ||||||
| HSP70 gene 2 UTR | 5′-AAGTGGACTGTTGGGACTCAAGGACTTTG-3′ | |||||
| 5′-CAAACAAACTCGTACAGAAGGTG-3′ | ||||||
| ATF4 | 5′-CTGTGGGTCTGCCCGTCCCAAAC-3′ | |||||
| 5′-TCAACTAGGGGACCCTTTTC-3′ | ||||||
| GADD34 | 5′-GAGCAGCTTGCTCGGGATCGC-3′ | |||||
| 5′-TCAGCCACGCCTCCCACTG-3′ | ||||||
| XBP1 | 5′-CTTTGTGGTTGAGAACCAGG-3′ | |||||
| 5′-GGGAGCTCCTCCAGGCTG-3′ | ||||||