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. 2004 Dec;15(12):5383–5398. doi: 10.1091/mbc.E04-08-0715

Table 2.

Reaction conditions

Method Reaction components Thermal conditions
Plasmid construction 1.25 mM dNTP mix (Qbiogene) 94°C 45 s/60°C 30 s/68°C 1 min 30 s
2.5 U of Platinum Pfx polymerase (Invitrogen) 25 cycles
5 μl of solution Q (Promega, Madison, WI)
5 μl of 10× Pfx buffer
2.5 mM magnesium
100 pmol/primer
10 ng of template
Double-distilled H2O to 50 μl
Digoxygenin-labeled DNA probes 10 μl of PCR DIG labeling mix (Roche Diagnostics) 95°C 1 min/50°C 1 min/72°C 30 s
2.5 U of Taq Polymerase (Fisher Scientific, Pittsburgh, PA) 30 cycles
10 μl of 10× Taq buffer A
1.5 mM magnesium
100 pmol/primer
10 ng of template
Double-distilled H2O to 100 μl
Reverse transcription 10 U of AMV-RT (Promega) 42°C 60 min/75°C 10 min
4 μl of 5× AMV-RT buffer
2 pmol of (oligo)dT15
40 U of RNAse inhibitor (Promega)
2.5 μg of RNA from heat-shocked COS7
1.25 mM dNTP mix
Double-distilled H2O to 20 μl