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. 2016 Aug 25;2(8):e000076. doi: 10.1099/mgen.0.000076

Table 2. Reasons for discordant results between NGMASTER and published data using SPAdes assemblies.

Reason for discordant result MEGAHIT SPAdes
Major errors (incorrect result)
Assembly error 0 10
Minor errors (incomplete/missing result)
Alternate conserved key motif 1 1
Multiple alleles detected 6 2
Allele not detected 29 0
Errors in published data
Possible sequence mix-up in published data 4 4
Probable transcription error in published data 1 1
Error in published data 1 1