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. Author manuscript; available in PMC: 2017 Feb 22.
Published in final edited form as: Bio Protoc. 2016 Dec 5;6(23):e2056. doi: 10.21769/BioProtoc.2056
Ingredients Stock concentration Final concentration
Tris-HCl (pH 8.0) 1 M 30 mM
EGTA 200 mM 4 mM
Sucrose - 30% (w/v)
Protease inhibitor cocktail (cOmplete EDTA-free) 50x (prepared according to manufacturer’s recommendation) 2x
Pepstatin A 1 mg/ml (in 100% methanol, see Note 5) 20 μg/ml
DTT 1 M 6 mM
PMSF 200 mM (in 100% ethanol) 10 mM
Benzamidine 320 mM 10 mM
Note: All stock solutions are prepared in ddH2O water if not stated otherwise. Stock solutions of protease inhibitor cocktail, pepstatin A and DTT stored at -20 °C; PMSF and Benzamidine stocks are prepared fresh. All of these are added to the buffer prior to the cell lysis step. It is important to carefully monitor the pH of this buffer. Deviations from pH 8.0 are detrimental for phagosome motility.