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. 2016 Dec 29;10(3):276–296. doi: 10.1111/eva.12450

Table 2.

Pairwise F ST values: Slatkin's linearized F ST a (above the diagonal) and Nei's mean number of pairwise differencesb (below the diagonal)c , d

2009PO_AQUA 2010PG_AQUA 2011PG_AQUA 2011PGN_AQUA 2012PG_AQUA TOB_WILD STW_WILD
2009PO_AQUA 0.051 0.057 0.064 0.028 0.046 0.132
2010PG_AQUA 0.049 0.034 0.003# 0.028 0.016 0.101
2011PG_AQUA 0.054 0.033 0.043 0.030 0.031 0.105
2011PGN_AQUA 0.060 0.003# 0.041 0.039 0.026 0.115
2012PG_AQUA 0.027 0.028 0.029 0.038 0.028 0.107
TOB_WILD 0.044 0.015 0.031 0.025 0.028 0.089
STW_WILD 0.116 0.092 0.095 0.103 0.096 0.082
a

Pairwise F ST values (Weir & Cockerham, 1984) calculated as Slatkin's linearized F ST (Slatkin, 1995) as implemented in Arlequin 3.5 (Excoffier & Lischer, 2010). All genetic distance measures are highly significant in a permutation test with 10,100 permutations at p = .00000 + −.0000 except for # which had p = .00762 + −.0009.

b

Nei's mean number of pairwise differences between pairs of populations is a method of measuring genetic distance when the characters are binary (Nei & Li, 1979) as implemented in Arlequin 3.5 (Excoffier & Lischer, 2010). All genetic distance measures are highly significant in a permutation test with 10,100 permutations at p = .00000 + −.0000 except for # which had p = .00762 + −.0009.

c

Full population names corresponding to these abbreviations are given in Table 1.

d

All genetic distance calculations were performed on a reduced dataset after individuals shown by STRUCTURE to have European ancestry had been removed.