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. 2015 Feb 7;7(3):706–719. doi: 10.1093/gbe/evv026

Table 3.

The Number of Nuclear Gene Trees Supporting Alternative Phrynosomatid Lizard Topologies

Clade Number of Loci Frequency (%)a
Holbrookia + Callisaurusb 175 37.2
Holbrookia + Callisaurus + Cophosaurusb 340 72.2
Sand lizardsb 210 44.6
Sand lizards + Phrynosomab 319 67.7
Sceloporinesb 226 48.0
Sceloporus + Urosaurus + Utab 91 19.3
Sceloporus + Urosaurusb 130 27.6
Cophosaurus + Callisaurus 120 25.5
Holbrookia + Cophosaurusc 103 21.9
Urosaurus + Utad 74 15.7
Sceloporus + Uta 63 13.4
Sceloporus + Petrosaurusd 55 11.7
Uma + Cophosaurus 19 4.0

aCalculated from complete loci only (471 total).

bClade supported by the sequence capture data in figure 1.

cEarless lizard clade.

dMitochondrial gene tree relationship.