TABLE 4.
Classification of proteins encoded by the RpoS-dependent genes identified based on Blattner functional categories (14)
| Functional category(ies) | No. of proteins in each category | Protein(s) |
|---|---|---|
| Cell structure | 1 | YbaY |
| Transport and binding proteins | 3 | GabP, UgpE, UgpC |
| Putative transport proteins | 2 | YdcS, YehX |
| Energy metabolism | 3 | NarY, AppB, LdcC |
| DNA replication, recombination, modification, and repair | 1 | AidB |
| Cell processes (including adaptation and protection) | 8 | KatE, UspB, OsmY, YhiV, YhiU, MltB, OtsA, EcnB |
| Amino acid biosynthesis and metabolism | 2 | ArgH, AroM |
| Fatty acid and phospholipid metabolism | 1 | YhjY |
| Carbon compound catabolism | 2 | YqhE, AldB |
| Central intermediary metabolism | 4 | GabD, PhnP, TalA, YfcG |
| Putative enzymes | 1 | Ylil |
| Hypothetical, unclassified, unknown | 17 | YjbJ, YjbE, YgaU, Ygdl, YgaF, YjgR, YdaM, YdcK, YhiN, YebF, YjiN, YeaG, YodC, YbiO, YhjG, YphA, YhjD |