Table 5. Runtime cost (seconds) on real cancer gene expression dataset.
Dataset | HC | k-means | SOM | LAC | WSPA | RDCFCE | EM-PCE |
---|---|---|---|---|---|---|---|
BreastB | 0.03 | 0.23 | 12.57 | 0.50 | 101.80 | 2510.98 | 302.70 |
DLBCLA | 0.09 | 0.24 | 4.96 | 0.58 | 117.63 | 1946.50 | 236.34 |
Leukemia | 0.33 | 0.90 | 13.10 | 3.28 | 412.93 | 4722.94 | 1144.20 |
NovartisBPLC | 0.07 | 0.19 | 8.10 | 0.61 | 87.44 | 2172.79 | 354.17 |
Pomeroy2002v2 | 0.03 | 0.23 | 21.18 | 0.36 | 40.01 | 1381.63 | 217.04 |
Ramaswamy2001 | 0.28 | 2.21 | 30.93 | 5.51 | 631.94 | 5248.20 | 2747.36 |
Risinger2003 | 0.04 | 0.23 | 70.00 | 0.43 | 43.56 | 1727.51 | 228.74 |
Su2001 | 0.27 | 1.73 | 36.12 | 5.16 | 466.25 | 5491.07 | 2098.11 |
Overall | 1.14 | 5.98 | 196.97 | 16.44 | 1910.56 | 10331.31 | 7328.66 |
The runtime costs of HC, k-means, SOM, LAC, WSPA, RDCFCE and EM-PCE on eight real gene expression datasets. RDCFCE costs more time than other methods.