Table 2. Top 20 down-regulated and up-regulated genes by HuR silencing in BCPAP.
| TOP 20 BCPAP down-regulated genes | TOP 20 BCPAP up-regulated genes | ||||
|---|---|---|---|---|---|
| Gene | Control FPKM | siRNA FPKM | Gene | Control FPKM | siRNA FPKM |
| SNORD98 | 32.08 | 0 | SNORA56 | 0 | 0.69 |
| RIIAD1 | 0.52 | 0 | MIR922 | 0 | 54.83 |
| MT1JP | 0.53 | 0 | HIST1H4G | 0 | 0.53 |
| CLDN3 | 0.56 | 0 | DDX26B | 0 | 0.60 |
| PPP1R14A | 0.61 | 0 | ZP4 | 0 | 0.61 |
| FAM25A | 1.13 | 0 | KISS1 | 0 | 0.72 |
| MIR5572 | 1.78 | 0 | GNG8 | 0 | 1.24 |
| SNORA70 | 2.46 | 0 | IFNL2 | 0 | 1.24 |
| MIR98 | 3.20 | 0 | IFNB1 | 0 | 1.61 |
| MIR941-2 | 5.45 | 0 | MIR3689B | 0 | 1.68 |
| MIR765 | 6.58 | 0 | IFNL1 | 0 | 2.12 |
| MIR7110 | 7.27 | 0 | SCARNA11 | 0 | 2.17 |
| MIR569 | 7.29 | 0 | MIR6129 | 0 | 3.32 |
| MIR135A2 | 7.66 | 0 | MIR5191 | 0 | 3.47 |
| MIR10A | 7.72 | 0 | MIR5193 | 0 | 3.68 |
| MIR567 | 7.80 | 0 | MIR5189 | 0 | 3.71 |
| MIR4441 | 7.85 | 0 | P2RX6P | 0 | 3.72 |
| MIR6785 | 7.87 | 0 | MIR454 | 0 | 4.07 |
| SNORD23 | 8.07 | 0 | MIR182 | 0 | 4.47 |
| MIR345 | 8.48 | 0 | MIR3940 | 0 | 4.58 |
FPKM = Fragments Per Kilobase Of Exon Per Million Fragments Mapped.