Table 3. Target genes of miRNAs in mulberry DL library.
| miRNA | Target | C.Site | Location | Score | Category | TP100M | P-Value |
|---|---|---|---|---|---|---|---|
| mno-miR156c | XM_010088675.1 | 943 | CDS | 1 | 2 | 4 | 0 |
| mno-miR156d | XM_010090407.1 | 493 | CDS | 2 | 2 | 87 | 0.006 |
| mno-miR156d | XM_010092101.1 | 158 | CDS | 4.5 | 2 | 3 | 0.006 |
| mno-miR156d | XM_010092348.1 | 757 | CDS | 2 | 2 | 87 | 0.006 |
| mno-miR156d | XM_010092557.1 | 198 | CDS | 4 | 2 | 5 | 0.006 |
| mno-miR156d | XM_010099345.1 | 87 | CDS | 4.5 | 2 | 2 | 0.006 |
| mno-miR156d | XM_010101121.1 | 278 | CDS | 4 | 2 | 4 | 0.006 |
| mno-miR156d | XM_010104394.1 | 1171 | CDS | 1 | 2 | 52 | 0.006 |
| mno-miR156d | XM_010114085.1 | 988 | CDS | 2 | 2 | 10 | 0.006 |
| mno-miR156f | XM_010090407.1 | 492 | CDS | 1 | 2 | 7 | 0 |
| mno-miR156f | XM_010092348.1 | 756 | CDS | 1 | 2 | 7 | 0 |
| mno-miR156f | XM_010104394.1 | 1170 | CDS | 2 | 2 | 10 | 0.004 |
| mno-miR156g | XM_010090407.1 | 492 | CDS | 0 | 2 | 7 | 0 |
| mno-miR156g | XM_010092101.1 | 157 | CDS | 2.5 | 4 | 1 | 0.01 |
| mno-miR156g | XM_010105976.1 | 1681 | CDS | 4.5 | 4 | 1 | 0.01 |
| mno-miR156g | XM_010110753.1 | 129 | CDS | 4.5 | 4 | 1 | 0.01 |
| mno-miR156g | XM_010111722.1 | 158 | CDS | 4 | 4 | 1 | 0.01 |
| mno-miR160b | XM_010105965.1 | 1316 | CDS | 1 | 2 | 4 | 0 |
| mno-miR166c | XM_010099828.1 | 561 | CDS | 1 | 2 | 2 | 0 |
| mno-miR166f | XM_010099828.1 | 560 | CDS | 2 | 0 | 126 | 0 |
| mno-miR166f | XM_010100268.1 | 590 | CDS | 2 | 0 | 25 | 0.002 |
| mno-miR171a | XM_010090594.1 | 1283 | CDS | 0.5 | 2 | 6 | 0 |
| mno-miR172c | XM_010093529.1 | 16 | CDS | 4 | 0 | 5 | 0.02 |
| mno-miR172e | XM_010114499.1 | 593 | CDS | 4 | 0 | 5 | 0.018 |
| mno-miR319c | XM_010093013.1 | 964 | CDS | 3 | 4 | 1 | 0.03 |
| mno-miR319c | XM_010098565.1 | 37 | CDS | 4.5 | 4 | 1 | 0.03 |
| mno-miR319c | XM_010109976.1 | 1086 | CDS | 3 | 0 | 183 | 0 |
| mno-miR319c | XM_010114597.1 | 300 | CDS | 3 | 3 | 2 | 0.004 |
| mno-miR396b | XM_010111150.1 | 1142 | CDS | 4 | 1 | 2 | 0.04 |
| mno-miR399d | XM_010100088.1 | 326 | CDS | 2.5 | 3 | 3 | 0 |
| mno-miR399e | XM_010100088.1 | 326 | CDS | 3.5 | 3 | 3 | 0.002 |
| mno-miR399f | XM_010100088.1 | 326 | CDS | 3 | 3 | 3 | 0.004 |
| mno-miR408c | XM_010095399.1 | 2180 | CDS | 4 | 1 | 6 | 0.01 |
| mno-miR4376 | XM_010106326.1 | 22 | CDS | 3 | 2 | 5 | 0.002 |
| mno-miR535 | XM_010104394.1 | 1169 | CDS | 3 | 2 | 3 | 0.048 |
| mno-miR828 | XM_010089439.1 | 653 | CDS | 3 | 4 | 1 | 0.026 |
| mno-miRn11-3p | XM_010095698.1 | 1333 | CDS | 3 | 2 | 4 | 0.016 |
| mno-miRn114-5p | XM_010112092.1 | 102 | CDS | 4 | 1 | 3 | 0.016 |
| mno-miRn118-5p | XM_010101413.1 | 2530 | CDS | 3 | 2 | 2 | 0.006 |
| mno-miRn120-3p | XM_010090594.1 | 1283 | CDS | 1 | 2 | 6 | 0 |
| mno-miRn121-3-5p | XM_010105099.1 | 692 | CDS | 4.5 | 0 | 10 | 0.042 |
| mno-miRn122-5p | XM_010093417.1 | 591 | CDS | 4 | 3 | 2 | 0.034 |
| mno-miRn14-1-5p | XM_010097134.1 | 1342 | CDS | 4.5 | 0 | 7 | 0.028 |
| mno-miRn144-5p | XM_010102397.1 | 573 | CDS | 4.5 | 2 | 2 | 0.006 |
| mno-miRn150-3p | XM_010114658.1 | 421 | CDS | 3.5 | 3 | 3 | 0.002 |
| mno-miRn157-5p | XM_010110553.1 | 2398 | CDS | 4 | 0 | 11 | 0.032 |
| mno-miRn166-3p | XM_010102826.1 | 998 | CDS | 3.5 | 0 | 6 | 0.002 |
| mno-miRn17-1-5p | XM_010097045.1 | 984 | CDS | 3 | 4 | 1 | 0.044 |
| mno-miRn17-1-5p | XM_010100274.1 | 1122 | CDS | 4.5 | 4 | 1 | 0.044 |
| mno-miRn17-1-5p | XM_010105164.1 | 337 | CDS | 4.5 | 4 | 1 | 0.044 |
| mno-miRn179-5p | XM_010102516.1 | 328 | CDS | 4 | 3 | 2 | 0.042 |
| mno-miRn193-5p | XM_010113910.1 | 612 | CDS | 3.5 | 0 | 5 | 0.004 |
| mno-miRn202-1-3p | XM_010092821.1 | 863 | CDS | 4.5 | 1 | 4 | 0.034 |
| mno-miRn202-1-3p | XM_010093270.1 | 1167 | CDS | 3.5 | 3 | 2 | 0.004 |
| mno-miRn2-1-5p | XM_010095892.1 | 1059 | CDS | 4.5 | 0 | 24 | 0.03 |
| mno-miRn220-5p | XM_010113440.1 | 797 | CDS | 4 | 4 | 1 | 0.034 |
| mno-miRn238-5p | XM_010104930.1 | 493 | CDS | 4 | 0 | 15 | 0.046 |
| mno-miRn25-1-3p | XM_010113161.1 | 77 | CDS | 4 | 0 | 5 | 0.03 |
| mno-miRn260-5p | XM_010110513.1 | 1280 | CDS | 4.5 | 1 | 4 | 0.024 |
| mno-miRn37-3p | XM_010114015.1 | 477 | CDS | 4 | 4 | 1 | 0.048 |
| mno-miRn46-5p | XM_010093108.1 | 3876 | CDS | 4.5 | 0 | 19 | 0.014 |
| mno-miRn62-1-5p | XM_010092824.1 | 18 | CDS | 4.5 | 1 | 4 | 0.026 |
| mno-miRn79-1-3p | XM_010091565.1 | 275 | CDS | 4 | 0 | 7 | 0.016 |
The same as Table 2.