Table 2. Transcripts cycling in two or more groups of circadian neurons.
| Cycles LNv | Cycles LNd | Cycles DN1 | Gene Ontology | |
|---|---|---|---|---|
| tim | + | + | + | Circadian rhythm |
| vri | + | + | + | Circadian rhythm |
| Pdp1 | + | + | + | Circadian rhythm |
| per | + | + | + | Circadian rhythm |
| SK | + | + | + | Small conductance potassium channel activity |
| CG31324 | + | + | + | Unknown |
| CG14086 | + | + | + | Unknown |
| ptip | + | + | + | Histone methylation |
| NAAT1 | + | + | + | Neurotransmitter; sodium symporter activity |
| ATPsynC | + | + | + | ATP hydrolysis coupled proton transport |
| CG31475 | + | + | + | Neuron projection morphogenesis |
| CG13995 | + | + | + | G-protein coupled receptor |
| CG13054 | + | + | Unknown | |
| CG17777 | + | + | Unknown | |
| CG18011 | + | + | Unknown | |
| CG32369 | + | + | Proteolysis | |
| CG6073 | + | + | Unknown | |
| USP8 | + | + | Protein deubiquitination | |
| MCT1 | + | + | Transmembrane transport | |
| CG31183 | + | + | cGMP-mediated signaling; cyclic nucleotide biosynthetic process | |
| Dh31 | + | + | Neuropeptide signaling pathway | |
| Orc2 | + | + | Neurogenesis; chromatin silencing | |
| twit | + | + | Regulation of neurotransmitter secretion | |
| CG14400 | + | + | Unknown | |
| Dyrk2 | + | + | Protein phosphorylation; response to light stimulus | |
| Tim8 | + | + | Protein targetting to mitochondria | |
| cwo | + | + | Circadian rhythm | |
| CG43902 | + | + | Unknown | |
| zye | + | + | Actin filament organization | |
| cals | + | + | Synaptic transmission | |
| mtm | + | + | Endocytic recycling | |
| scra | + | + | Neurogenesis | |
| CG32313 | + | + | Unknown | |
| CG32000 | + | + | Cation transport | |
| CG9005 | + | + | Response to endoplasmic reticulum stress | |
| CG11576 | + | + | Unknown | |
| CG1971 | + | + | Unknown | |
| CG7852 | + | + | Regulation of Rab protein signal transduction | |
| Tm1 | + | + | Dendrite morphogenesis | |
| CG43143 | + | + | Protein phosphorylation | |
| sli | + | + | Neuron differentiation; axon midline choice point recognition | |
| CG11486 | + | + | Nuclear transcribed mRNA poly(A) tail shortening |
List of genes whose transcripts cycle in at least two of three groups of circadian neurons. CLK/CYC controlled clock genes are listed at the top. If the transcript was a low-confidence cycler in the third group of circadian neurons, this is denoted with a small “+” sign. The molecular function proposed by gene ontology analysis is listed for each gene.