Extended Data Table 5. Pseudogenized and deleted core genes in the two reference genomes.
| P. vivax ID | Annotation | P. malariae | P. o. curtisi |
|---|---|---|---|
| PVP01_0412100 | Multidrug efflux pump | Pseudo | Pseudo |
| PVP01_0309300 | Erythrocyte vesicle protein 1 | Pseudo | |
| PVP01_1032500 | Conserved Plasmodium protein, unknown function | Pseudo | |
| PVP01_1344900 | Serine/Threonine protein phosphatase CPPED1 | Pseudo | |
| PVP01_1407400 | MORN repeat protein | Pseudo | |
| PVP01_1107900 | 6-cysteine protein (P92) | Deleted | |
| PVP01_1117100 | Conserved Plasmodium protein, unknown function | Pseudo | |
| PVP01_0906000 | WD repeat-containing protein WRAP73 | Deleted | |
| PVP01_0929100 | 6-phosphofructokinase | Pseudo | |
| PVP01_0940700 | Carbonic anhydrase | Deleted | Pseudo |
| PVP01_1445600 | Conserved Plasmodium protein, unknown function | Pseudo | |
| PVP01_237400 | Nucleoside Transporter 3 | Pseudo | |
| PVP01_1123700 | Conserved Plasmodium protein, unknown function | Pseudo | Pseudo |
| PVP01_1246900 | Biotin protein ligase | Pseudo |
The first column shows the gene identifier of the P. vivax P01 homologue of the gene pseudogenized and/or deleted in one or more of the two reference genome assemblies. The second column is the P. vivax P01 annotation of that gene. The following two columns show whether the gene is functional (blank), pseudogenized (‘pseudo’) or deleted (‘deleted’).