Fig. 2.
Comparative MD analysis of the XPA98–210-Zn, XPA98–210-Ni, and XPA98–210-apo systems. (a) RMSD values of all the Cα atoms during the simulation time. (b) Probability distribution of RMSDs. (c) RMSF values of all the Cα atoms. (d) RMSFs’ correlation of XPA98–210-Zn with XPA98–210-Ni and XPA98–210-apo. (e) Flexibility distribution of XPA98–210 system. Red, blue, and gray colors represent the high, low, and