Table 2.
Non-resident pathogenic bacteria at high abundance in IFTA samples at 6-8 months post-transplant. Literature citations are provided for bacteria species that have demonstrated the ability to produce infection or cause immune stimulation.
| Males | Females | ||
|---|---|---|---|
| Sample | Bacteria Species (% composition) | Sample | Bacteria Species (% composition) |
| IIFTA |
Propionibacterium acne (17%), Cupriavidus NA (11%) (37) |
14IFTA |
Gardnerella vaginalis (18%) (38), Prevotella timonensis (15%) (39) |
| 2IFTA | Gardnerella vaginalis (90%) (38) | 15IFTA |
Gardnerella NA (47%), Prevotella melaninogenica (28%) (40) |
| 3IFTA |
Prevotella disiens (51%)(41), Campylobacter ureolyticus (14%) (42) |
16IFTA |
Gardnerella NA (45%), Corynebacterium NA (29%) |
| 4IFTA |
Gardnerella vaginalis (22%) (38), Veillonella NA (25%) |
17IFTA | NA |
| 5IFTA |
Corynebacterium sundsvallense & C.
tuberculostearicum (25%) (43), Peptoniphilus NA (23%) |
18IFTA |
Anaerococcus NA (29%), Pseudomonas NA (23%), Campylobacter ureolyticus (15%) (42) |
| 6IFTA |
Corynebacterium tuberculostearicum (51%) (43), Staphylococcus NA (39%) |
19IFTA |
Prevotella timonensis (15%) (39), Anaerococcus NA (11%) |
| 7IFTA |
Corynebacterium pyruviciproducens (46%) (43, 44) |
20IFTA | Atopobium vaginae (37%) (41) |
| 8IFTA |
Corynebacterium pyruviciproducens & C.
tuberculostearicum (50%) (43), Finegoldia magna (15%) (41, 45) |
21IFTA |
Finegoldia magna (22%) (45), Prevotella bivia & P. buccalis (41) (13%) |
| 9IFTA |
Corynebacterium pyruviciproducens C.
tuberculostearicum (41%) (43), Finegoldia magna (34%) (41), Anaerococcus prevoti) (18%) (46) |
22IFTA |
Prevotella timonensis (41%) (39), Gardnerella vaginalis (22%) (38), Anaerococcus lactolyticus (20%) (41) |
| 10IFTA |
Corynebacterium pyruviciproducens & C.
sundsvallense (14%) (43, 44) |
23IFTA |
Prevotella timonensis (39) & P. disiens
(36%) (41), Atopobium NA (16%) |
| 11IFTA |
Finegoldia magna (45%) (45), Corynebacterium pyruviciproducens (24%) (44) |
24IFTA | Gardnerella vaginalis (35%) (38) |
| 12IFTA |
Gardnerella NA (28%), Anaerococcus NA (20%) |
||
| 13IFTA |
Prevotella bivia (40%) (47), Anaerococcus lactolyticus & A. tetradius (35%) (41) |
||
Note: No specie (NA) is given in cases where the majority of the reads are unable to be mapped to a bacteria specie (i.e. ‘slash reads’).