Table 1.
Description of origin and clinical source of the Latin American genomes analysed in this study.
| Strain | Country | Clinical origin | Age of patient |
|---|---|---|---|
| CA22019 | Colombia | Atrophic gastritis | 38 |
| CA22020 | Colombia | Atrophic gastritis | 64 |
| CA22095 | Colombia | Atrophic gastritis | 52 |
| CA22311 | Colombia | Atrophic gastritis | 47 |
| CA22312 | Colombia | Atrophic gastritis | 57 |
| CA22327 | Colombia | Atrophic gastritis | 52 |
| CA22335 | Colombia | Atrophic gastritis | ND |
| CA22337 | Colombia | Atrophic gastritis | 46 |
| CA22339 | Colombia | Atrophic gastritis | ND |
| CA22362 | Colombia | Atrophic gastritis | 34 |
| CA22393 | Colombia | Atrophic gastritis | 62 |
| CA24004 | Colombia | Atrophic gastritis | 80 |
| CA26024 | Colombia | Atrophic gastritis | 63 |
| CC22093 | Colombia | Gastric cancer | 43 |
| CC22402 | Colombia | Gastric cancer | 55 |
| CC26084 | Colombia | Gastric cancer | 70 |
| CC26093 | Colombia | Gastric cancer | 70 |
| CC26100 | Colombia | Gastric cancer | 70 |
| CG22023 | Colombia | Gastritis | 64 |
| CG22025 | Colombia | Gastritis | 36 |
| CG22087 | Colombia | Gastritis | 30 |
| CG22322 | Colombia | Gastritis | 44 |
| CG22366 | Colombia | Gastritis | 38 |
| CG22367 | Colombia | Gastritis | 30 |
| CG22370 | Colombia | Gastritis | 37 |
| CG22371 | Colombia | Gastritis | 37 |
| CG22378 | Colombia | Gastritis | 43 |
| CG22385 | Colombia | Gastritis | 59 |
| CG22389 | Colombia | Gastritis | 63 |
| CM22013 | Colombia | Metaplasia | 78 |
| CM22021 | Colombia | Metaplasia | 59 |
| CM22046 | Colombia | Metaplasia | 64 |
| CM22315 | Colombia | Metaplasia | 49 |
| CM22331 | Colombia | Metaplasia | 55 |
| CM22341 | Colombia | Metaplasia | 47 |
| CM22346 | Colombia | Metaplasia | 59 |
| CM22347 | Colombia | Metaplasia | 45 |
| CM22351 | Colombia | Metaplasia | 43 |
| CM22360 | Colombia | Metaplasia | 50 |
| CM22368 | Colombia | Metaplasia | 61 |
| CM22388 | Colombia | Metaplasia | 58 |
| CM22390 | Colombia | Metaplasia | 53 |
| MM2003-103 | Mexico | Metaplasia | 52 |
| MC2006-52 | Mexico | Gastric cancer | 51 |
| MC2011-145 | Mexico | Gastric cancer | 34 |
| MCms1054 | Mexico | Gastric cancer | 68 |
| MCms1055 | Mexico | Gastric cancer | 78 |
| MCms1063 | Mexico | Gastric cancer | 60 |
| MCms1078 | Mexico | Gastric cancer | 34 |
| MCms1080 | Mexico | Gastric cancer | 58 |
| MCms931 | Mexico | Gastric cancer | 56 |
| MG2003-107 | Mexico | Gastritis | 34 |
| MG2003-98 | Mexico | Gastritis | 51 |
| MG2005-100 | Mexico | Gastritis | 56 |
| MG2005-98 | Mexico | Gastritis | 48 |
| MG2006-4 | Mexico | Gastritis | 39 |
| MG2006-407 | Mexico | Gastritis | 55 |
| MG2006-479 | Mexico | Gastritis | 36 |
| MG2011-41 | Mexico | Gastritis | 69 |
| MGms13 | Mexico | Gastritis | 42 |
| MGms15 | Mexico | Gastritis | 66 |
| MGms167 | Mexico | Gastritis | 36 |
| MGms176 | Mexico | Gastritis | 44 |
| MGms2 | Mexico | Gastritis | 47 |
| MGms203 | Mexico | Gastritis | 34 |
| MGms23 | Mexico | Gastritis | 34 |
| MGms44 | Mexico | Gastritis | 66 |
| MM2004-20 | Mexico | Metaplasia | 49 |
| MM2005-72 | Mexico | Metaplasia | 52 |
| MM2006-103 | Mexico | Metaplasia | 72 |
| MM2005-126 | Mexico | Metaplasia | 52 |
| MM2006-480 | Mexico | Metaplasia | 58 |
| MM2006-56 | Mexico | Metaplasia | 73 |
| MM2012-26 | Mexico | Metaplasia | 68 |
| MU2003-84 | Mexico | Metaplasia | 46 |
| MU2004-2 | Mexico | Metaplasia | 41 |
| Nic01_A | Nicaragua | Atrophic Gastritis | 48 |
| Nic02_A | Nicaragua | Atrophic Gastritis | 66 |
| Nic03_A | Nicaragua | Atrophic Gastritis | 29 |
| Nic04_A | Nicaragua | Atrophic Gastritis | 34 |
| Nic05_A | Nicaragua | Atrophic Gastritis | 27 |
| Nic06_A | Nicaragua | Atrophic Gastritis | 47 |
| Nic07_A | Nicaragua | Atrophic Gastritis | 27 |
| Nic08_C | Nicaragua | Gastritis | 27 |
| Nic09_A | Nicaragua | Atrophic Gastritis | 53 |
| Nic10_A | Nicaragua | Gastritis | 35 |
| Nic11_A | Nicaragua | Atrophic Gastritis | 58 |
| Nic12_A | Nicaragua | Atrophic Gastritis | 32 |
| Nic13_A | Nicaragua | Gastritis | 30 |
| Nic14_A | Nicaragua | Gastritis | 36 |
| Nic15_A | Nicaragua | Gastritis | 44 |
| Nic16_A | Nicaragua | Gastritis | 24 |
| Nic17_A | Nicaragua | Atrophic Gastritis | 35 |
| Nic18_A | Nicaragua | Atrophic Gastritis | 27 |
| Nic19_A | Nicaragua | Metaplasia | 47 |
| Nic20_A | Nicaragua | Metaplasia | 47 |
| Nic21_A | Nicaragua | Metaplasia | 53 |
| Nic22_A | Nicaragua | Gastritis | 26 |
| Nic23_A | Nicaragua | Metaplasia | 55 |
| Nic25_A | Nicaragua | Metaplasia | 58 |
| Nic26_A | Nicaragua | Gastritis | 58 |
| Nic27_A | Nicaragua | Gastritis | 40 |
| Nic28_A | Nicaragua | Gastritis | 18 |
| Nic29_A | Nicaragua | N/A | 60 |
| Nic30_A | Nicaragua | Gastritis | 53 |
| Nic31_A | Nicaragua | N/A | 30 |
| Nic32_A | Nicaragua | Gastritis | 24 |
Sequences and clinical information of Nicaraguan strains are deposited at Sequence Read Archive, SRA with the accession number PRJNA242766.