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. 2017 Jan 3;8(2):484–499. doi: 10.1364/BOE.8.000484

Table 2. Summary of the immunofluorescence quality analysis. A qualitative as well as the two quantitative characteristics are listed (1) to describe the specificity of the stain, (2) to estimate the signal intensity obtained from the staining protocol described by the SNB ratio and (3) to rate the homogeneity of the antibody stain described by the R-value of the similarity of the intensity profiles to the DAPI stain. Stain specificity: Green indicates that the stain for microtubules shows the spindle apparatus during mitosis and that β-catenin is located at the cell periphery. Signal intensity: Green indicates a ratio above 60, orange indicates ratios between 30 and 60 and white is used for a ratio below 30. Signal homogeneity: Green indicates above 0.75, orange indicates between 0.55 and 0.74 and, white is used for values below 0.54.

stain specificity signal intensity signal homogeneity
PFA-Triton-4°C o.n. α-tubulin yes 19.40 0.568
PFA-Triton-4°C o.n. β-catenin yes 60.63 0.501
PFA-Triton-37°C 4 hours α-tubulin yes 62.41 0.823
PFA-Triton-37°C o.n. α-tubulin yes 81.75 0.797
PFA-Triton-37°C 4 hours β-catenin yes 137.10 0.633
PFA-Triton-37°C o.n. β-catenin yes 274.58 0.433
PFA-EtOH-37°C 4 hours α-tubulin yes 25.86 0.706
PFA-EtOH-37°C o.n. α-tubulin yes 50.71 0.589
PFA-EtOH-37°C 4 hours β-catenin yes 71.23 0.559
PFA-EtOH-37°C o.n. β-catenin yes 187.75 0.488
PFA-MetOH-37°C 4 hours α-tubulin yes 25.22 0.762
PFA-MetOH-37°C o.n. α-tubulin no 50.92 0.857
PFA-MetOH-37°C 4 hours β-catenin yes 107.27 0.435
PFA-MetOH-37°C o.n. β-catenin yes 119.76 0.713
MetOH-Ac-37°C 4 hours α-tubulin no 15.13 0.956
MetOH-Ac-37°C o.n. α-tubulin no 22.69 0.876
MetOH-Ac-37°C 4 hours β-catenin yes 33.52 0.870
MetOH-Ac-37°C o.n. β-catenin yes 106.41 0.709
EtOH-37°C 4 hours α-tubulin no 36.30 0.947
EtOH-37°C o.n. α-tubulin no 109.37 0.884
EtOH-37°C 4 hours β-catenin yes 113.56 0.875
EtOH-37°C o.n. β-catenin yes 260.54 0.846

Ac: acetone, EtOH: ethanol, MetOH: methanol, o.n.: overnight.