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. 2016 Nov 15;9(1):17–40. doi: 10.1007/s12551-016-0236-4

Table 1.

Comparison of the fit parameters persistence length P ds, contour length B ds, and elastic stretch modulus S ds of the WLC model, all obtained at saturated protein concentration, as well as the dissociation constant K D and the cooperativity parameter ω for single box and double box HMGB proteins

DNAa DNA + Nhp6Aa DNA + HMGB2a DNA + TFAM DNA + HMO1d DNA + Abf2p
P ds (nm) 48 ± 2 5.5 ± 0.5 4.6 ± 0.5 4 ± 2b 7.6 ± 1.0
B ds (nm/bp) 0.340 ± 0.002 0.378 ± 0.002 0.378 ± 0.001 0.367 ± 0.018b 0.363 ± 0.001
S ds (pN) 1400 ± 100 1000 ± 200 1600 ± 200 1300 ± 500b 1360 ± 400
K D (nM) 71 ± 14 180 ± 30 ∼4c
∼9b
2.3 ± 0.4 ∼400e
∼40f
∼1400g
ω 20 20 70 ± 14b 23 ± 4

a(McCauley et al. 2013)

b(Farge et al. 2012)

c(Kaufman et al. 2007)

d(Murugesapillai et al. 2014)

e(Cho et al. 2001)

f(Brewer et al. 2003)

g(Friddle et al. 2004)