Table 2.
Possible candidate genes identified from the QTL regions associated with early vigor and related traits.
| S.No. | Chr. | Gene | Locus | Base pair | Start | End |
|---|---|---|---|---|---|---|
| 1 | 3 | Glutamate decarboxylase | Os03g0236200 | 2,957 | 7,230,405 | 7,233,361 |
| 2 | 3 | Ethylene-insensitive 3 | Os03g0324300 | 9,433 | 11,820,185 | 11,829,617 |
| 3 | 3 | Expansin precursor | Os03g0428700 | 1,012 | 18,570,738 | 18,571,749 |
| 4 | 4 | alpha-amylase precursor | Os04g0403300 | 5,370 | 20,025,314 | 20,030,683 |
| 5 | 4 | Glutamate decarboxylase | Os04g0447800 | 2,163 | 22,728,745 | 22,730,907 |
| 6 | 4 | Phenylalanine ammonia-lyase | Os04g0518100 | 3,182 | 26,305,431 | 26,308,612 |
| 7 | 4 | Phenylalanine ammonia-lyase | Os04g0518400 | 2,640 | 26,325,630 | 26,328,269 |
| 8 | 5 | Expansin precursor | Os05g0276500 | 1,781 | 11,404,176 | 11,405,956 |
| 9 | 5 | Phenylalanine ammonia-lyase | Os05g0427400 | 2,151 | 20,960,453 | 20,962,603 |
| 10 | 5 | Expansin precursor | Os05g0477600 | 1,919 | 23,542,813 | 23,544,731 |