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. 2017 Feb 15;18(Suppl 2):24. doi: 10.1186/s12859-016-1447-1

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© The Author(s) 2017

Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License(http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver(http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 1 — The PRODIGEN interface consists of several visual components: (left top) the ensemble Spaghetti Plots view shows the probability distribution over time, for all the proteins in a system; (left middle) the 1D heatmap view shows a per-protein view of the probability peaks; (left bottom) the Peak Glyph view (displayed as a small multiple) represents all the probability peak states in the system; (center) the 2D heatmap view is enhanced with time-curves, and shows the probability peak correlation between protein pairs over space and time; (right) the animated 3D Surface view describes the shapes of peaks over space and time