| Sample | Species | Library-prep | Reference genome | SRA experiment accession |
| HEK293.1 | HEK293 | rRNA depleted | hg38 | SRX2431511 |
| HEK293.2 | HEK293 | rRNA depleted | hg38 | SRX2473824 |
| Liver.1 | Black-6 mouse | rRNA depleted/RNaseR+ | mm10 | SRX2504988 |
| Liver.2 | Black-6 mouse | rRNA depleted/RNaseR+ | mm10 | SRX2504990 |
| Heart.1 | Black-6 mouse | rRNA depleted/RNaseR+ | mm10 | SRX2504987 |
| Heart.2 | Black-6 mouse | rRNA depleted/RNaseR+ | mm10 | SRX2504989 |