Table 1. Summary of Restraints Used for NMR Structure Determination of Mal d 1.0101 and Structure Refinement Statistics.
experimental restraintsa | |
total no. of NOE-based distance restraints | 2079 |
intraresidue [i = j] | 658 |
sequential [|i–j| = 1] | 678 |
medium range [1 < |i – j| < 5] | 307 |
long-range [|i–j| ≥ 5] | 436 |
dihedral angle restraints | 308 |
hydrogen bond restraints | 131 |
total no. of restraints | 2518 |
total no. of restraints per residue | 15.9 |
long-range restraints per residue | 3.2 |
restraint violationsb | |
distance violations/structure | |
0.1–0.2 Å | 14.3 |
0.2–0.5 Å | 2.75 |
>0.5 Å | 0 |
RMS of distance violation/restraint | 0.02 Å |
max distance violationc | 0.50 Å |
dihedral angle violations/structure | |
1–10° | 0.2 |
>10° | 0 |
RMS of dihedral angle violation/constraint | 0.06° |
max dihedral angle violation | 2.60° |
RMSD valuesd | |
backbone atoms | 0.4 Å |
heavy atoms | 1.0 Å |
bond lengths | 0.010 Å |
bond angles | 1.4° |
Ramachandran plot statistics | |
most favored regions | 92.7% |
allowed regions | 6.6% |
disallowed regions | 0.7% |
Numbers are given for all residues (1–158).
Calculated for all residues, using sum over r– 6.
Largest violation among all 20 reported structures.
Generated using the PSVS software suite.31