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. 2017 Mar 3;18:148. doi: 10.1186/s12859-017-1514-2

Table 2.

Results of parameter optimization for DISMS2 with partial R-squared (adonis)

Rank topn bin ret dist cdis partial R-squared
1 0.20 3000 d cos 0.3 0.923
2 50 0.20 3000 d cos 0.3 0.923
3 20 0.20 3000 d cos 0.3 0.923
4 0.20 3000 d cos 0.1 0.892
5 50 0.20 3000 d cos 0.1 0.892
6 20 0.01 3000 d cos 0.3 0.890
7 20 0.20 3000 d cos 0.1 0.890
8 50 0.01 3000 d cos 0.3 0.890
9 0.01 3000 d cos 0.3 0.890
10 20 0.01 3000 d PH 0.3 0.879
11 0.20 1000 d cos 0.3 0.878
23 20 0.20 3000 d angle 0.6 0.808
81 0.20 3000 d angle 0.3 0.308

Accepted precursor mass shift constant (prec = 10 ppm)

Bold printed lines correspond to the optimized parameters for the different distance measures