Table 3. Evolutionary rates and selection profiles determined with the HA and NA genes of H3N2 strains circulating for the 2009/10-2011/12 seasons.
Evolutionary rate (x 10−3 substitution/site/year)a | Selection profiles | ||||
---|---|---|---|---|---|
Gene | Nucleotide | Synonymous | Nonsynonymous | dN/dS | # of positive selection site |
HA | 4.84 ± 0.47 | 2.34 ± 0.02 | 2.15 ± 0.02 | 0.354 | 2 (45, 261)b |
NA | 3.87 ± 0.31 | 2.27 ± 0.01 | 1.42 ± 0.01 | 0.269 | 3 (44, 81, 151) |
aStandard deviation of evolutionary rates is indicated with ‘± values’.
bPositive selection residues (H3N2 numbering) are indicated in parenthesis.