Skip to main content
. 2017 Mar 3;12(3):e0173198. doi: 10.1371/journal.pone.0173198

Table 6. Functional classification of unique genes of N. seriolae UTF1 by KEGG modules.

KEGG Module Module ID Description Number of genes
Environmental information processing
    ABC-2 type and other transport systems M00254 ABC-2 type transport system 12
M00258  Putative ABC transport system 2
    Mineral and organic ion transport system M00188 NitT/TauT family transport system 1
M00190  Iron(III) transport system 2
M00299 Spermidine/putrescine transport system 4
    Phosphotransferase system (PTS) M00273  PTS system, fructose-specific II component 3
    Phosphate and amino acid transport system M00233  Glutamate transport system 1
    Two-component regulatory system M00452  CusS-CusR (copper tolerance) two-component regulatory system 2
M00475  BarA-UvrY (central carbon metabolism) two-component regulatory system 1
    Bacterial secretion system M00335 Sec (secretion) system 1
    Drug efflux transporter/pump M00713  Fluoroquinolone resistance, efflux pump LfrA  1
    Drug resistance M00742  Aminoglycoside resistance, protease FtsH  1
M00743  Aminoglycoside resistance, protease HtpX 1
M00727  Cationic antimicrobial peptide (CAMP) resistance, N-acetylmuramoyl-L-alanine amidase AmiA and AmiC 1
M00745  Imipenem resistance, repression of porin OprD  2
M00714 Multidrug resistance, efflux pump QacA 1
Energy metabolism
    ATP synthesis M00159  V-type ATPase, prokaryotes 5
M00149 Succinate dehydrogenase, prokaryotes 4
M00151  Cytochrome bc1 complex respiratory unit 1
    Nitrogen metabolism M00530 Dissimilatory nitrate reduction, nitrate = > ammonia 1
    Methane metabolism M00345 Formaldehyde assimilation, ribulose monophosphate pathway 1
Carbohydrate and lipid metabolism
    Fatty acid metabolism M00083  Fatty acid biosynthesis, elongation 3
M00082  Fatty acid biosynthesis, initiation 1
    Central carbohydrate metabolism M00307 Pyruvate oxidation, pyruvate = > acetyl-CoA 3
Nucleotide and amino acid metabolism
    Serine and threonine metabolism M00555  Betaine biosynthesis, choline = > betaine 1
    Cysteine and methionine metabolism M00021  Cysteine biosynthesis, serine = > cysteine 2
    Other amino acid metabolism M00027  GABA (gamma-Aminobutyrate) shunt 1
Genetic information processing
    Ribosome M00178  Ribosome, bacteria 1