Table 3.
Genetic mutations found in the 5′ and 3′-ends of HPV62-L1
| Nucleotide changes (PGMY primers) | Amino acid change | Number of samples with the mutation n = 11 | Nucleotide changes (FAP primers) | Amino acid change | Number of samples with the mutation n = 9 |
|---|---|---|---|---|---|
| c.969 T > C | 2 | c.250A > G | p.T84A | 9 | |
| c.987A > C * | p.E329D | 3 | c.263C > G | p.A88G | 7 |
| c.1017G > A | 1 | c.265A > T | p.T89S | 1 | |
| c.1071 T > C * | 3 | c.413C > T | p.A138V | 1 | |
| c.1104G > A | 1 | c.436A > G | p.I146V | 1 | |
| c.1236 T > C | 3 | c.438C > T | 1 | ||
| c.1256A > G | p.H419R | 4 | c.468A > G | 1 | |
| c.1279A > G * | p.T427A | 1 | c.495A > T | 5 | |
| c.1287A > G | 3 | c.495A > G | 1 | ||
| c.516C > A | 1 |
Nucleotide changes are shown in samples amplified with PGMY or FAP primers. The amino acid changes are described for those with non-synonymous mutations. The number of samples that carry each nucleotide change are included. (*) Already reported mutations