Table 4.
Genotype and allele frequencies of SNP markers in commercially crossbred pigs
| SNP | N | Genotype frequency | Allele frequency | |||
|---|---|---|---|---|---|---|
|
|
|
|||||
| AA | AB | BB | A1) | B | ||
| SSC7 g.4937240C>G | 565 | 0.48 | 0.36 | 0.16 | 0.65 | 0.35 |
| SSC8 g.47338181G>A | 513 | 0.64 | 0.24 | 0.12 | 0.76 | 0.24 |
| SSC9 g.5496647_5496662insdel | 585 | 0.28 | 0.58 | 0.14 | 0.57 | 0.43 |
| SSC10 g.71225134G>A | 601 | 0.81 | 0.19 | 0.00 | 0.90 | 0.10 |
| SSC17 g.61976696G>T | 570 | 0.52 | 0.30 | 0.18 | 0.67 | 0.33 |
SNP, single nucleotide polymorphism.
1)
Allele A represents major alleles of the SSC7 g.4937240C, SSC8 g.47338181A, SSC9 g.5496647_5496662del, SSC10 g.71225134A and SSC17 g.61976696G loci, respectively and allele B represents minor alleles of the SSC7 g.4937240G, SSC8 g.47338181G, SSC9 g.5496647_5496662ins, SSC10 g.71225134G and SSC17 g.61976696T loci, respectively.