Table 1. Assessment of missense SNPs in exon regions.
SNP | gene | AA change | SIFT | polyphen2 | PROVEAN | FATHMM |
---|---|---|---|---|---|---|
rs7578597 | THADA | T1187A | Tolerated | benign | Tolerated | Tolerated |
rs2228603 | NCAN | P92S | Tolerated | probably damaging | Tolerated | Tolerated |
rs58542926 | TM6SF2 | E167K | Tolerated | probably damaging | Tolerated | Tolerated |
rs2641348 | ADA30 | L359P | Tolerated | benign | Tolerated | Tolerated |
rs11073964 | VP33B | G514S | Tolerated | benign | Tolerated | Tolerated |
rs56200889 | ARAP1 | Q1047E | Tolerated | benign | Tolerated | Tolerated |
rs17240268 | AMPN | A311V | Tolerated | possibly damaging | Tolerated | Tolerated |
rs13266634 | ZNT8 | R276W | Tolerated | NA | NA | Damaging |
rs1801212 | WFS1 | V333I | Tolerated | benign | Tolerated | Tolerated |
rs1801214 | WFS1 | N500K | Tolerated | NA | Tolerated | Tolerated |
rs734312 | WFS1 | R611H | Tolerated | benign | Tolerated | Tolerated |
rs5219 | IRK11 | K23E | Tolerated | benign | NA | Tolerated |
rs757081 | NUCB2 | Q338E | Tolerated | benign | Tolerated | Tolerated |
rs757110 | ABCC8 | A1369S | Tolerated | benign | Tolerated | Tolerated |
rs2276904 | UVSSA | R391H | Tolerated | benign | Tolerated | Tolerated |
rs1260326 | GCKR | L446P | Tolerated | possibly damaging | Tolerated | Tolerated |
rs1051334 | TSPAN8 | S213A | Damaging | benign | Tolerated | Tolerated |
SNPs potentially disrupting the functions of proteins were assessed by four well-known predictors.