Table 4.
Result of gene set enrichment analysis (GSEA Preranked)
| Top of the ranked gene sets name (FDR q-val<0.01) | SIZE | NES | FDR q-val |
|---|---|---|---|
| ROSS-AML-WITH-PML-RARA-FUSION | 70 | 7.968 | 0.000 |
| JAATINEN-HEMATOPOIETIC-STEM-CELL-UP | 218 | 5.853 | 0.000 |
| CASORELLI-ACUTE-PROMYELOCYTIC-LEUKEMIA-UP | 159 | 5.550 | 0.000 |
| MULLIGHAN-MLL-SIGNATURE-2-DN | 269 | 5.394 | 0.000 |
| IVANOVA-HEMATOPOIESIS-EARLY-PROGENITOR | 365 | 5.265 | 0.000 |
| CAIRO-HEPATOBLASTOMA-UP | 203 | 5.027 | 0.000 |
| VERHAAK-AML-WITH-NPM1-MUTATED-DN | 237 | 4.962 | 0.000 |
| PENG-GLUTAMINE-DEPRIVATION-DN | 327 | 4.920 | 0.000 |
| SHEN-SMARCA2-TARGETS-UP | 415 | 4.764 | 0.000 |
| VALK-AML-CLUSTER-12 | 29 | 4.741 | 0.000 |
| Bottom of the ranked gene sets name (FDR q-val<0.01) | SIZE | NES | FDR q-val |
| JAATINEN-HEMATOPOIETIC-STEM-CELL-DN | 196 | -11.905 | 0.000 |
| MCLACHLAN-DENTAL-CARIES-UP | 235 | -8.740 | 0.000 |
| GOLDRATH-ANTIGEN-RESPONSE | 302 | -8.515 | 0.000 |
| MULLIGHAN-MLL-SIGNATURE-2-UP | 397 | -8.440 | 0.000 |
| VERHAAK-AML-WITH-NPM1-MUTATED-UP | 179 | -7.729 | 0.000 |
| POOLA-INVASIVE-BREAST-CANCER-UP | 268 | -7.695 | 0.000 |
| MCLACHLAN-DENTAL-CARIES-DN | 226 | -7.656 | 0.000 |
| MULLIGHAN-MLL-SIGNATURE-1-UP | 361 | -7.588 | 0.000 |
| SMID-BREAST-CANCER-NORMAL-LIKE-UP | 451 | -7.512 | 0.000 |
| ROSTY-CERVICAL-CANCER-PROLIFERATION-CLUSTER | 137 | -7.486 | 0.000 |