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. 2017 Feb 14;114(9):E1745–E1754. doi: 10.1073/pnas.1621314114

Table S1.

Biological pathways enriched for binding targets of (phosphorylated) CRYAB, yielded by WebGestalt analysis, using the Wikipathways database of biological pathways

Rank Pathway name No. of targets/reference proteins Adjusted P value*
Native CRYAB
 1 Cytoplasmic Ribosomal Proteins 24/78 4.32E-42
 2 mRNA Processing 13/456 5.80E-09
 3 Prostaglandin Synthesis and Regulation 3/31 0.0005
 4 Regulation of Actin Cytoskeleton 4/160 0.0049
 5 Urea Cycle and Metabolism of Amino Groups 2/22 0.0057
 6 Oxidative Phosphorylation 2/60 0.0335
P-Ser59 CRYAB
 1 Cytoplasmic Ribosomal Proteins 8/78 2.54E-10
 2 Glycolysis and Gluconeogenesis 6/50 1.84E-08
 3 mRNA Processing 11/456 6.70E-08
 4 TCA Cycle 4/32 4.16E-06
 5 Electron Transport Chain 5/101 1.47E-05
 6 Amino Acid Metabolism 4/112 0.0004
 7 Striated Muscle Contraction 3/44 0.0004
 8 T Cell Receptor Signaling Pathway 4/143 0.0007
 9 Oxidative Phosphorylation 3/60 0.0007
 10 Regulation of Actin Cytoskeleton 4/160 0.0009
 11 Circadian Exercise 2/49 0.0084
 12 FAS Pathway and Stress Induction of HSP Regulation 2/50 0.0084
 13 MAPK Signaling Pathway 3/165 0.0089
P-Ser45 CRYAB
 1 Cytoplasmic Ribosomal Proteins 8/78 5.15E-09
 2 Glycolysis and Gluconeogenesis 6/50 1.98E-07
 3 DNA Replication 5/41 2.03E-06
 4 Proteasome Degradation 5/59 9.69E-06
 5 Cell Cycle 5/95 8.15E-05
 6 TNF-α NF-κB Signaling Pathway 6/213 0.0003
 7 G1 to S Cell Cycle Control 4/65 0.0003
 8 Myometrial Relaxation and Contraction Pathways 5/158 0.0006
 9 Striated Muscle Contraction 3/44 0.0011
 10 mRNA Processing 7/456 0.002
 11 PluriNetWork 5/289 0.0064
 12 Circadian Exercise 2/49 0.0221
 13 Wnt Signaling Pathway NetPath 3/141 0.0221
 14 Calcium Regulation in the Cardiac Cell 3/152 0.0252
 15 Oxidative Phosphorylation 2/60 0.0282
 16 IL-5 Signaling Pathway 2/80 0.0453
P-Ser19 CRYAB
 1 Cytoplasmic Ribosomal Proteins 31/78 4.19E-52
 2 mRNA Processing 23/456 9.76E-17
 3 Electron Transport Chain 5/101 0.0005
 4 Oxidative Phosphorylation 3/60 0.0104

Listed are pathways that are enriched for binding targets of (i) native, (ii) phospho-Ser-59, (iii) phospho-Ser-45, and (iv) phospho-Ser-19 CRYAB. Most highly enriched pathways (compared with other CRYAB phosphorylation states) are depicted in bold, and pathways uniquely enriched for targets of a specific phosphorylation state are depicted in italics.

*

P value determined by hypergeometric testing, after Benjamini–Hochberg adjustment for multiple testing.