Table 3.
Comparison of coding and non-coding region sizes among twelve Oryza species.
| Region | O. aust | O. min | O. niv | O. rufi | O. s. ind | O. s. jap | O. offi | O. barth | O. punc | O. meri | O. long | O. glum |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PROTEIN CODING | ||||||||||||
| Length (bp) | 59,700 | 61,062 | 68,598 | 56,133 | 61,464 | 66,444 | 59,433 | 59,385 | 62,964 | 55,329 | 59,499 | 59,496 |
| GC(%) | 39.3 | 39.5 | 39.7 | 39.3 | 39.5 | 39.6 | 39.4 | 39.4 | 39.3 | 39.1 | 39.3 | 39.3 |
| Length (%) | 44.1 | 45.1 | 51 | 41.7 | 45.7 | 49.3 | 44 | 44 | 59.8 | 41.1 | 44.2 | 44.2 |
| tRNA | ||||||||||||
| Length (bp) | 2,866 | 3,031 | 2,865 | 2,772 | 2,795 | 2,784 | 2,474 | 2,474 | 3,043 | 3,049 | 2,474 | 2,474 |
| GC(%) | 53.2 | 52.1 | 53 | 52.3 | 53 | 52.9 | 52.7 | 52.7 | 51.7 | 52.6 | 52.7 | 52.7 |
| Length (%) | 2.1 | 2.2 | 2.1 | 2 | 2 | 2 | 1.83 | 1.83 | 2.2 | 2.2 | 1.83 | 1.83 |
| rRNA | ||||||||||||
| Length (bp) | 9,190 | 9,190 | 9,190 | 9,190 | 9,190 | 9,182 | 9,190 | 9,190 | 9,190 | 9,190 | 9,190 | 9,190 |
| GC(%) | 54.8 | 54.8 | 54.8 | 54.8 | 54.8 | 54.7 | 54.8 | 54.8 | 54.8 | 54.8 | 54.8 | 54.8 |
| Length (%) | 6.7 | 6.8 | 6.8 | 6.8 | 6.8 | 6.8 | 6.8 | 6.8 | 6.8 | 6.8 | 6.8 | 6.8 |
| Intergenic | 63,468 | 61,811 | 53,841 | 66,449 | 60,999 | 56,115 | 63,814 | 63,625 | 59,407 | 66,990 | 63,404 | 63,423 |
| GC(%) | 36 | 36 | 37 | 37 | 36 | 36 | 35 | 35 | 36 | 36 | 37 | 35 |
| Length (%) | 47 | 45.8 | 41 | 50 | 45.4 | 41.8 | 47.4 | 47.3 | 44.2 | 49.8 | 47.2 | 47.2 |
O. aust, O. australiensis; O. min, O. minuta; O. niv, O. nivara; O. rufi, O. rufipogon; O. sat. ind, O. sativa indica; O.s. jap, O. sativa japonica; O. offi, O. officinalis; O. barth, O. barthii; O. punc, O. punctata; O. meri, O. meridionalis; O. long, O. longistaminata; O. glum, O. glumipatula.