Table 1.
Characteristics of K. pneumoniae strains sequenced in this study.
| Strain ID | Isolate origin | Molecular subtype | Genome sequencing results | |||||
|---|---|---|---|---|---|---|---|---|
| Isolation date | Isolation hospital | Outbreak or sporadic | PFGE type | MLST type | No. of reads | Genome length (Mbp) | Coverage (%) | |
| TR196 | 2011.10.10 | Hospital A | Outbreak | PT1-1 | ST11 | 5064323 | 5,530,671 | 99.98 |
| TR187 | 2011.10.08 | Hospital A | Outbreak | PT1-1 | ST11 | 5114610 | 5,535,384 | 99.98 |
| TRqt-44 | 2011.10.14 | Hospital A | Outbreak | PT1-1 | ST11 | 1929825 | 5,550,893 | 99.99 |
| TR191 | 2011.10.10 | Hospital A | Outbreak | PT1-1 | ST11 | 4776142 | 5,547,137 | 99.99 |
| TRqt-38 | 2011.10.11 | Hospital A | Outbreak | PT1-1 | ST11 | 2313187 | 5,552,446 | 99.99 |
| TR215 | 2011.11.01 | Hospital A | Outbreak | PT1-1 | ST11 | 5113987 | 5,529,661 | 99.99 |
| TR249 | 2011.11.28 | Hospital A | Outbreak | PT1-1 | ST11 | 5070157 | 5,530,509 | 99.98 |
| TR237 | 2011.11.22 | Hospital A | Outbreak | PT1-1 | ST11 | 4923904 | 5,551,691 | 99.99 |
| TR213 | 2011.11.02 | Hospital A | Outbreak | PT1-1 | ST11 | 4889624 | 5,535,549 | 99.98 |
| TR214 | 2011.10.31 | Hospital A | Outbreak | PT1-1 | ST11 | 4433786 | 5,546,545 | 99.99 |
| TR210 | 2011.10.24 | Hospital A | Outbreak | PT1-1 | ST11 | 5506132 | 5,539,211 | 99.99 |
| TR197 | 2011.10.11 | Hospital A | Outbreak | PT1-1 | ST11 | 5208391 | 5,551,279 | 99.99 |
| TRqt-37 | 2011.10.11 | Hospital A | Outbreak | PT1-1 | ST11 | 5368038 | 5,541,521 | 99.99 |
| TRqt-47 | 2011.10.18 | Hospital A | Outbreak | PT1-5 | ST11 | 1210367 | 5,476,896 | 99.99 |
| TRqt-48 | 2011.10.18 | Hospital A | Outbreak | PT1-1 | ST11 | 1986985 | 5,502,861 | 99.98 |
| TR198 | 2011.10.16 | Hospital A | Outbreak | PT1-4 | ST11 | 1498670 | 5,544,398 | 99.99 |
| TR231-M | 2011.11.19 | Hospital A | Outbreak | PT1-6 | ST11 | 2002247 | 5,714,983 | 99.99 |
| TR221 | 2011.11.16 | Hospital A | Outbreak | PT1-6 | ST11 | 1981562 | 5,722,498 | 99.99 |
| TRqt-43 | 2011.10.18 | Hospital A | Outbreak | PT1-1 | ST11 | 2222462 | 5,553,936 | 99.99 |
| TR258 | 2011.12.12 | Hospital A | Outbreak | PT1-2 | ST11 | 4825797 | 5,788,988 | 99.99 |
| TRqt-41 | 2011.10.18 | Hospital A | Outbreak | PT1-1 | ST11 | 5272726 | 5,550,545 | 99.99 |
| TR200 | 2011.10.21 | Hospital A | Outbreak | PT1-1 | ST11 | 3560444 | 5,546,753 | 99.99 |
| TR209 | 2011.10.24 | Hospital A | Outbreak | PT1-1 | ST11 | 4717301 | 5,549,132 | 99.99 |
| TRqt-49 | 2011.10.27 | Hospital A | Outbreak | PT1-1 | ST11 | 1997590 | 5,545,007 | 99.98 |
| TR207 | 2011.10.29 | Hospital A | Outbreak | PT1-1 | ST11 | 5510939 | 5,550,137 | 99.99 |
| TR262 | 2011.12.23 | Hospital A | Outbreak | PT1-3 | ST11 | 2551943 | 5,574,152 | 99.98 |
| A1502 | 2012.08.17 | Hospital B | Sporadic | PT3 | ST11 | 4735099 | 5,352,016 | 99.98 |
| A1732 | 2011.12.13 | Hospital C | Sporadic | PT6 | ST11 | 3006404 | 5,361,926 | 99.99 |
| A1760 | 2011.12.19 | Hospital D | Sporadic | PT2 | ST11 | 6285811 | 5,558,188 | 99.99 |
| A1763 | 2011.12.2 | Hospital E | Sporadic | PT4 | ST11 | 3486502 | 5,473,965 | 99.99 |
| A1771 | 2011.12.22 | Hospital F | Sporadic | PT5 | ST11 | 3094363 | 5,712,663 | 99.99 |