Table 2. Reactions of diazo acetamides (DAAs) with oligonucleotides.
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Entry | Substrate | Diazo compound | Time (min) | Conv. (%) |
1 | d(TGT) | 15 | 78 b | |
2 | d(TGT) | 15 | 78 b | |
3 | d(ATGC) | 150 | 62 b | |
4 | d(ATGC) c | 30 | 74 b | |
5 | d(ATGC) | 150 | 61 b | |
6 | d(TTTTGTTTT) | 30 | 92 b | |
7 | d(TTTTGTTTT) | 30 | 81 b | |
8 | d(AACAGTCATATCCTTA) | 180 | 48 | |
9 | d(AACAGTCATATCCTTA) | 180 | 40 | |
10 | d(ATGC) c | 150 | 66 b |
aComplete conditions: 5 mM substrate, 1 mM CuSO4, 5 mM ascorbate, 50 mM diazo compound, 100 mM MES pH 6, DMSO 20% (v/v), H2O, 25 °C.
bG-alkylation was assigned on the basis of tandem MS fragmentation ions.
cSame conditions as a but with 20% (v/v) dioxane instead of DMSO.