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. 2016 Aug 20;7(41):66700–66712. doi: 10.18632/oncotarget.11449

Table 3. Primers for real-time PCR to detect target pathogens.

Primers Product size (bp) Target gene Annealing temperature (°C)
Universal primer
5′-ACTCCTACGGGAGGCAGCAGT-3′ 180 16s rRNA 60
5‘-TATTACCGCGGCTGCTGGC-3′
H. pylori
5′-CAAGAAGGGCGCACTCTTTT-3′ 250 Ure A 60
5′-CGATTTGAACCGGTCTGTCG-3′
F. nuclearum
5′-TACCAACAGAAGAAGTGACGGCTAA-3′ 162 16s rRNA 60
5′-ATACAGTTTCCAACGCAATACAGAG-3′
S. mutans
5′-GGTCAGGAAAGTCTGGAGTAAAAGGCTA-3′ 260 16s rRNA 60
5′-GCGTTAGCTCCGGCACTAAGCC-3′
S. sanguis
5′-TTCAAAGCCAAGACCAAGCTAGT-3′ 88 16s rRNA 60
5′-CCAGCCTGAGATTCAGCTTGT-3′
A. actinomycetemcomitans
5′-CTTACCTACTCTTGACATCCGAA-3′ 77 16s rRNA 60
5′-ATGCAGCACCTGTCTCAAAGG-3′
P. gingivalis
5′-TGTAGATGACTGATGGTGAAAACC-3′ 178 16s rRNA 60
5′-ACGTCATCCACACCTTCCTC-3′
T. forsythia
5′-AGCGATGGTAGCAATACCTGTC-3′ 88 16s rRNA 60
5′-TTCGCCGGGTTATCCTC-3′
P. intermedia
5′-TCCACCGATGAATCTTTGGTC-3′ 98 16s rRNA 60
5′-ATCCAACCTTCCCTCCACTC-3′
T. denticola
5′-AGAGCAAGCTCTCCCTTACCGT-3′ 105 16s rRNA 60
5′-TAAGGGCGGCTTGAAATAATGA-3′