Table 1. Regulation of selected genes and extracellular protein levels of human Natural Killer cells in the presence or absence of Aspergillus fumigatus.
human NK cells | gene expression | protein level | ||||
---|---|---|---|---|---|---|
gene (molecule) | x-fold change | 2−ΔΔ Ct; NK/NK+Af | P | pg/mL; NK/NK+Af | P | |
Cytotoxic molecules | ||||||
PRF1 (perforin) | -3 | 2.1 ± 0.1/0.7 ± 0.1 | < 0.0001 | 16229 ± 1814/17355 ± 1302 | ns | |
GZMB (granzyme B) | -2.6 | 0.8 ± 0.1/0.3 ± 0.1 | 0.001 | 2752 ± 544/4172 ± 314 | ns | |
Pro-inflammatory molecules | ||||||
IFNG (interferon-gamma) | +38 | 0.2 ± 0.1/7.6 ± 3.1 | 0.036 | 97 ± 49/74 ± 33 | ns | |
GMCSF (GM-CSF) | +4.6 | 0.7 ± 0.1/3.2 ± 0.7 | 0.015 | 29 ± 14/28 ± 11 | ns | |
MIP1A (macrophage inflammatory protein 1α) | +3.7 | 0.6 ± 0.1/2.2 ± 0.5 | 0.016 | 1900 ± 768/1891 ± 784 | ns | |
MIP1B (macrophage inflammatory protein 1β) | +3.7 | 0.7 ± 0.1/2.6 ± 0.7 | 0.044 | 2402 ± 805/1923 ± 448 | ns |
Relative change of the mRNA expression of the gene of interest after 8 hours of (co-) incubation relative to the housekeeping gene and to time point at hour 0, respectively. The first value represents the results in NK cells incubated alone (NK), the second value the results in NK cells incubated with the fungus (NK+Af) (mean±SEM each). Negative values of “x-fold change” indicate down-regulation, positive values up-regulation.
Protein levels in the supernatant of the molecule of interest were assessed after 8 hours. The first value represents the results in NK cells incubated alone (NK), the second value the results in NK cells incubated with the fungus (NK+Af) (mean±SEM each). Shown are the results of at least five independent experiments.