Table 5. Subgroup analysis for hsa05322: histological subtypes, sex, age, smoking.
hsa05322: SLE | META-GSA | Gene | Location | concordance | significance |
---|---|---|---|---|---|
pGS | pgene | ||||
AdenoLC | 0.0030 | HIST2-1q21.2 | 1q21.2 | -0.6 | 0.1666 |
SqCLC | 0.0376 | H2AFV | 7p13 | 0.5 | 0.7209 |
SCLC | 0.0626 | C1QA | 1p36.12 | -0.5 | 0.7101 |
HIST2-1q21.2 | 1q21.2 | -0.5 | 0.0577 | ||
ELANE | 19p13.3 | 0.5 | 0.4864 | ||
HIST1-6p22.2 | 6p22.2 | 0.5 | 0.2177 | ||
HIST1-6p22.2 | 6p22.2 | 0.5 | 0.2177 | ||
LCLC | 0.2056 | -- | |||
male | 0.1453 | HIST1H3C | 6p22.2 | -0.5 | 0.3726 |
female | 0.0112 | HIST1H2AL | 6p22.1 | 0.5 | 0.1229 |
old (>50) | 0.0002 | HIST1-6p22.1a | 6p22.1 | -0.7 | 0.0054 |
HIST1-6p22.1b | 6p22.1 | 0.5 | 0.1578 | ||
C2 | 6p21.3 | 0.5 | 0.0013 | ||
H2AFV | 7p1 | 0.6 | 0.4005 | ||
young (≤50) | 0.0588 | -- | |||
current smokers | 0.3563 | HIST1-6p22.1a | 6p22.1 | 0.4 | 0.1720 |
H3F3C | 12p11.21 | 0.4 | 0.5821 | ||
HIST3H3 | 1q42 | 0.4 | 0.6468 | ||
HIST1-6p22.1b | 6p22.1 | 0.4 | 0.2028 | ||
HIST1-6p22.1c | 6p22.1 | 0.4 | 0.3375 | ||
former smokers | 0.4691 | -- | |||
ever smokers | 0.5132 | HIST1-6p22.1a | 6p22.1 | 0.5 | 0.0462 |
HIST1-6p22.1c | 6p22.1 | 0.5 | 0.1587 | ||
never smokers | 0.5429 | FCGR3A | 1q23 | -0.5 | 0.2300 |
CTSG | 14q11.2 | -0.5 | 0.3403 |
Listed are genes, respectively regions containing genes with .
HIST2-1q21.2: HIST2H2AA3 / HIST2H2AA4 / HIST2H3C / HIST2H4B.
HIST3-1q42: HIST3H2A / HIST3H2BB / HIST3H3.
HIST1-6p22.1a: HIST1H4K / HIST1H2AK / HIST1H2AL / HIST1H2BM / HIST1H2BN / HIST1H3I / HIST1H4L / HIST1H3J / HIST1H4J (27.800K).
HIST1-6p22.1b: HIST1H2AG / HIST1H2BK (27.150 K).
HIST1-6p22.1c: HIST1H2BI / HIST1H3G / HIST1H4H (26.280 K).
HIST1-6p22.2: HIST1H3E / HIST1H2AE / HIST1H2BG / HIST1H4E (26.200 K).
The numbers in brackets are the approximate locations according to dbGENE.