Table S1.
Results of the pairwise haplotype test of the case and control groups
| Haplotypea | Frequency (%)
|
P-valuesb | P-valuesc | |
|---|---|---|---|---|
| Case | Control | |||
| rs1061170–rs10801555 | ||||
| T-G | 85.7 | 86.6 | 0.42 | |
| T-A | 8.0 | 8.4 | 0.69 | |
| C-A | 6.3 | 4.8 | 0.05 | 0.18 |
| rs10922096–rs2019727 | ||||
| C-A | 49.2 | 49.9 | 0.68 | |
| C-T | 42.3 | 42.5 | 0.89 | |
| T-A | 8.4 | 7.3 | 0.23 | |
| rs10733086–rs10737680 | ||||
| A-A | 48.8 | 49.6 | 0.61 | |
| T-A | 43.3 | 41.8 | 0.38 | |
| T-C | 7.9 | 8.4 | 0.60 | |
Notes:
a
Haplotypes with frequency <0.03 were ignored in analysis.
b
The P-values for single haplotype test, df=1, not corrected for multiple test.
c
P-values adjusted after 10,000 permutations. Significance is presented in bold.