QTL	Quantitative trait locus
InDel	Insertion/deletion
CNV	Copy number variation
PAV	Present/absent variation
cM	Centimorgan
A-BC	Advanced backcross population
RIL	Recombinant inbred line
NIL	Near-isogenic line
NAM	Nested association mapping
MAGIC	Multi-parent advanced generation inter-cross
LD	Linkage disequilibrium
GWAS	Genome-wide association studies
SNP	Single nucleotide polymorphism
DArT	Diversity Arrays Technology
RAD	Restriction site-associated DNA marker
RRL	Reduced-representation library
CRoPS	Complexity reduction of polymorphic sequence
GBS	Genotyping-by-sequencing
IBL	Inbred backcross line
MATE	Multidrug and toxic compound extrusion
SRAP	Sequence-related amplified polymorphism
TRAP	Target region amplification polymorphism
SRR	Simple sequence repeat
RAPD	Random amplified polymorphic DNA
AFLP	Amplified fragment length polymorphism