Table 1.
Crop | Genus | Species | Germplasm | Assembled Genome Size (Mb) | Predicted Genome Size (Mb) | Available Database(s) * | Reference |
---|---|---|---|---|---|---|---|
Soybean | Glycine | max | Cultivated (William 82) | 950 | 1115 | 1, 2 | [65] |
Soybean | Glycine | soja | Wild | 868 | 1170 | [66] | |
Soybean | Glycine | soja | Wild | 813–985 | 889–1118 | [67] | |
Peanut | Arachis | duranensis | Wild | 1211 | 1250 | 3 | [28] |
Peanut | Arachis | ipaensis | Wild | 1512 | 1560 | [28] | |
Pea | Pisum | sativum | N/D | N/D | 4685 # | 4, 5 | [13] |
Chickpea | Cicer | arietinum | Cultivated (desi-type) | 520 | 740 | 6, 4, 7 | [68] |
Chickpea | Cicer | arietinum | Cultivated (kabuli-type) | 532 | 738 | [69] | |
Chickpea | Cicer | arietinum | Cultivated (desi-type) | 511 | 740 | [70] | |
Chickpea | Cicer | reticulatum | Wild | 416 | 817 | [71] | |
Common bean | Phaseolus | vulgaris | Landrace | 473 | 587 | 6, 4, 8, 2 | [41] |
Common bean | Phaseolus | vulgaris | Breeding lines | 550 | 587 | [72] | |
Lentil | Lens | culinaris | N/D | N/D | 4032 # | 4 | [13] |
Cowpea | Vigna | unguiculata | Cultivated (IT97K-499-35) | Not complete | 620 | 9 | [73] |
Lupin | Lupinus | angustifolius | Cultivated (Tanjil) | 609 | 951 | 6, 10, 11 | [74] |
Lupin | Lupinus | angustifolius | Cultivated (Tanjil) | 598 | 1153 | [75] | |
Pigeonpea | Cajanus | cajan | Cultivated (Asha) | 606 | 833 | 6 | [76] |
Pigeonpea | Cajanus | cajan | Cultivated (Asha) | 511 | 858 | [77] |
* Major online databases for de novo genome information: N/D no data available; # The predicted genome size is extracted from [13]: 1, http://soybase.org; 2, https://phytozome.jgi.doe.gov/pz/portal.html; 3, http://peanutbase.org/home; 4, http://knowpulse.usask.ca/portal/; 5, https://urgi.versailles.inra.fr/Data/Genome/Genome-data-access; 6, http://legumeinfo.org/genomes; 7, http://nipgr.res.in/CGAP/home.php; 8, http://phaseolusgenes.bioinformatics.ucdavis.edu/; 9, http://cowpeagenomics.med.virginia.edu/CGKB; 10, http://www.lupinexpress.org/node/6; 11, http://www.ncbi.nlm.nih.gov/bioproject/PRJNA179231.