Table 4.
List of identified and characterized PaWB related to proteins in other species.
| Accession | HP vs. PIP | Annotation | Gene resources | Function classification | References |
|---|---|---|---|---|---|
| CL51.Contig1_All | Up | 20S proteasome beta subunit | Arabidopsis | Post-translational modification, protein turnover, chaperones | Dielen et al., 2011 |
| CL2295.Contig5_All | Up | Ubiquitin extension protein | Jatropha | Post-translational modification, protein turnover, chaperones | Tao et al., 2015 |
| CL6965.Contig2_All | Up | Subunit of chloroplasts chaperonins | Arabidopsis, | Post-translational modification, protein turnover, chaperones | Zhang et al., 2016 |
| CL9610.Contig1_All | Up | Peptidyl-Prolyl Isomerase | Arabidopsis, | Post-translational modification, protein turnover, chaperones | Bissoli et al., 2012 |
| CL1409.Contig1_All | Up | Protein grpE | Arabidopsis | Post-translational modification, protein turnover, chaperones | Hu et al., 2012 |
| CL5562.Contig2_All | Up | fk506- and rapamycin-binding protein | Arabidopsis, | Post-translational modification, protein turnover, chaperones | Xiong and Sheen, 2012 |
| CL9305.Contig3_All | Down | Component of the light harvesting complex | Arabidopsis | Photosynthesis | Bressan et al., 2016 |
| Unigene11985_All | Down | Chloroplast thylakoid lumen protein | Arabidopsis | Photosynthesis | Wang et al., 2016; Zhu, 2016 |
| CL13475.Contig1_All | Down | Photosystem I subunit E-2 | Arabidopsis | Photosynthesis | Ihnatowicz et al., 2007 |
| Unigene12214_All | Down | Alpha carbonic anhydrase | Arabidopsis | Photosynthesis | Zhurikova et al., 2016 |
| CL13475.Contig2_All | Down | Subunit E of photosystem I | Arabidopsis | Photosynthesis | Ihnatowicz et al., 2007 |
| CL8582.Contig1_All | Down | Plastid-specific ribosomal protein 4 | Arabidopsis | Photosynthesis | Tiller et al., 2012 |
| CL12525.Contig1_All | Up | Ca2+-binding protein | Arabidopsis | Cell signal transduction | Zhou et al., 2013 |
| Unigene12188_All | Up | Ca2+-binding protein | Arabidopsis | Cell signal transduction | Zhou et al., 2013 |
| CL473.Contig1_All | Up | ATP synthase gamma subunit | Arabidopsis | Energy metabolism | Budak et al., 2013 |
| CL13354.Contig2_All | Down | NADP-malic enzyme | Arabidopsis | Energy metabolism | Tronconi et al., 2008 |
| Unigene11563_All | Up | Subunit of glyceraldehyde-3-phosphate dehydrogenase | Arabidopsis | Energy metabolism | Guo et al., 2014 |
| Unigene22259_All | Up | Pectin methylesterase | Arabidopsis | Plant defense | Bethke et al., 2014 |
| CL13450.Contig1_All | Up | Aldo/keto reductase | Jatropha, rice | Plant defense | Mudalkar et al., 2016 |
| Unigene29082_All | Up | Cinnamyl-alcohol dehydrogenase | Medicago | Plant defense | Zhao et al., 2013 |
| CL3972.Contig3_All | Up | Fasciclin-like arabinogalactan protein | Populus, | Plant defense | Wang H. et al., 2015 |
| CL7387.Contig1_All | Up | Germin-like protein | Arabidopsis | Plant defense | Beracochea et al., 2015 |
| CL8516.Contig2_All | Up | Protein tyrosine phosphatases | Rice | Carbohydrate transport and metabolism | Singh et al., 2010 |
| CL8015.Contig1_All | Up | Glycerophosphoryl diester phosphodiesterase-like protein | Arabidopsis | Glycerol metabolism | Hayashi et al., 2008 |
| CL12982.Contig1_All | Up | Disulfide isomerase-like protein | Arabidopsis | Cell redox homeostasis | Wittenberg et al., 2014 |
| CL9983.Contig2_All | Up | GDSL-motif esterase | Arabidopsis | Carboxylic ester hydrolase | Meyer et al., 2012 |
| Unigene32404_All | Up | Plastid-lipid associated protein | Arabidopsis | Abscisic acid-mediated photoprotection | Youssef et al., 2010 |
| CL399.Contig1_All | Up | Subunit of magnesium chelatase | Barley | Coenzyme transport and metabolism | Braumann et al., 2014 |
| CL4384.Contig3_All | Up | Ubiquitin-fold modifier 1-like isoform | Arabidopsis | Phosphatidylinositol biosynthetic process | Paula and Williams, 2016 |
| CL4374.Contig1_All | Up | Rubisco small subunit | Arabidopsis | Photorespiration | Ido et al., 2015 |
| Unigene18956_All | Up | Rubisco small subunit | Arabidopsis | Photorespiration | Ido et al., 2015 |
| CL3902.Contig3_All | Down | Plasma membrane H+-ATPase | Arabidopsis | Inorganic ion transport and metabolism | Yamauchi et al., 2016 |
| CL13468.Contig1_All | Down | Lipid-transfer protein-like protein | Arabidopsis | Lipid transport | Edstam and Edqvist, 2014 |
| CL11604.Contig1_All | Up | Acetyl-CoA carboxylase BCCP subunit | Arabidopsis | Fatty acid biosynthesis | Salie et al., 2016 |
| Unigene764_All | Up | Glycine-rich RNA-binding protein | Arabidopsis | General function prediction | Yang et al., 2014 |
| CL4020.Contig3_All | Up | A linker histone like protein | Saccharomyces | DNA binding | Georgieva et al., 2015 |
| CL6642.Contig1_All | Up | Ribosomal protein L6 family protein | Escherichia coli | Translation, ribosomal structure and biogenesis | Shigeno et al., 2016 |
| Unigene4318_All | Up | Histone H2A | Arabidopsis | Chromatin structure and dynamics | Yelagandula et al., 2014 |
| CL6457.Contig2_All | Up | Enhancer of sos3-1 | Tobacco | rRNA processing | Li et al., 2013 |
| Unigene10439_All | Up | Membrane-associated progesterone binding protein 2 | Arabidopsis | Steroid binding | Yang et al., 2005 |
| Unigene21155_All | Up | Unknown/hypothetical | ———– | Unknown/hypothetical | ———– |
| CL5467.Contig1_All | Up | Unknown/hypothetical | ———– | Unknown/hypothetical | ———– |
| CL13502.Contig1_All | Up | Unknown/hypothetical | ———– | Unknown/hypothetical | ———— |