Table 2. BUSCO gene content assessment for D. serrata and two different D. melanogaster assemblies, version r6.05 from www.flybase.org, and the full ISO 1 PacBio assembly of Berlin et al. (2015) consisting of 790 contigs, also constructed with the PBcR pipeline.
| Category | D. serrata | D. kikkawai | D. melanogaster | |
|---|---|---|---|---|
| r6.05 | PacBio | |||
| Complete Single-copy BUSCOs (%) | 94.1 | 97.1 | 98.2 | 97.7 |
| Duplicated (%) | 2.1 | 1.0 | 0.5 | 0.6 |
| Fragmented BUSCOs (%) | 2.5 | 1.2 | 0.8 | 0.8 |
| Missing BUSCOs (%) | 1.3 | 0.8 | 0.5 | 0.9 |
A total of 2799 BUSCOs were searched that form a set of highly conserved Dipteran genes. PacBio, Pacific Biosciences; BUSCO, Benchmarking Universal Single-Copy Ortholog.