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. 2017 Jan 24;7(3):943–952. doi: 10.1534/g3.116.038877

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Copyright © 2017 Niu et al.

This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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Reproducibility of sGWAS results using OATH with NSS for RTG under three Mg conditions. Each column represents β (top) and p-values (bottom) under low-, normal-, and high-Mg conditions. The y-axis represents the statistics from OATH synthesized from NSS, and the x-axis from the sGWAS; the red points are QTL detected in the sGWAS. Correlations are shown in the top left corner of each panel. GWAS, genome-wide association studies; Mg, magnesium; NSS, naïve summary statistics; OATH, Open GWAS algoriTHm; QTL, quantitative trait loci; RTG, days to root germination; sGWAS, saturated GWAS.