Table 2. Statistics of clean reads in chicken preadipocytes.
| A0-1 | A0-2 | A0-3 | A2-1 | A2-2 | A2-3 | A4-1 | A4-2 | A4-3 | A6-1 | A6-2 | A6-3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Total Clean Reads | 114,225,220 | 138,217,716 | 110,196,390 | 124,574,594 | 104,305,988 | 117,527,324 | 103,271,936 | 118,853,588 | 116,411,784 | 97,058,458 | 80,727,160 | 47,404,424 |
| Base Number (G) | 17.13 | 20.73 | 16.53 | 18.69 | 15.65 | 17.63 | 15.49 | 17.83 | 17.46 | 14.56 | 12.11 | 11.21 |
| Q30 Reads (%) | 94.13 | 94.28 | 94.30 | 93.86 | 93.35 | 93.90 | 92.81 | 93.04 | 93.15 | 93.18 | 93.20 | 92.95 |
| Mapped Reads | 95,086,176 | 114,733,972 | 89,511,292 | 105,009,893 | 86,995,436 | 98,963,734 | 86,984,909 | 94,319,305 | 92,922,064 | 81,432,206 | 66,010,294 | 61,915,627 |
| CDS (%) | 68.53 | 69.93 | 70.07 | 69.32 | 68.73 | 68.55 | 66.91 | 69.80 | 67.62 | 66.67 | 68.50 | 66.17 |
| Intron (%) | 5.86 | 5.34 | 5.85 | 6.36 | 6.82 | 7.09 | 7.32 | 6.31 | 7.38 | 8.18 | 6.77 | 8.28 |
| Intergenic (%) | 14.60 | 14.50 | 14.83 | 14.49 | 14.65 | 14.59 | 14.93 | 14.90 | 15.68 | 15.11 | 15.90 | 16.08 |
| UTR (%) | 11.00 | 10.22 | 9.25 | 9.83 | 9.80 | 9.77 | 10.84 | 9.00 | 9.33 | 10.03 | 8.83 | 9.47 |
CDS, coding DNA sequence; UTR, untranslated region.