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. 2017 Mar 13;8:375. doi: 10.3389/fmicb.2017.00375

Table 5.

wgMLST compared against Lyve-SET for outbreaks of L. monocytogenes.

1308MDGX6-1 1408MLGX6-3WGS 1411MLGX6-1WGS
PHYLOGENETIC COMPARISONS
pKendall–Colijn (λ = 0) 1E-999 1E-999 1E-4
pRobinson–Foulds 5.53E-108 1.76E-263 3.79E-71
GENOMIC DISTANCE COMPARISONS
Mantel R2 0.74 0.73 0.75
Correlation coefficient 0.64 0.73 0.70
Trend line R2 0.64 0.77 0.84