TABLE 1 .
Whole-genome characterization of Salmonella Typhi isolates from clinical specimensa
| Isolate ID | Sequence type | Yr of isolation | Total size (bp) | CDSs, rRNAs, tRNAs | Coverage (×) | Contigs (≥500 bp) | CRISPRs | Antimicrobial resistance gene(s) | Plasmid | Accession no. |
|---|---|---|---|---|---|---|---|---|---|---|
| 429038 | 1 | 2016 | 4,801,759 | 5,234, 10, 58 | 61 | 65 | 1 | blaSHV-12, qnrB7 | IncX3 | MQUL00000000 |
| 430040 | 1 | 2016 | 4,798,259 | 4,263, 11, 60 | 51 | 61 | 1 | blaSHV-12, qnrB7 | IncX3 | MQUM00000000 |
| 7830 | 592 | 2016 | 4,831,725 | 5,151, 14, 67 | 58 | 58 | 2 | blaCMY-2 | IncA/C2 | MQUN00000000 |
| 458426 | 1 | 2016 | 4,796,415 | 5,237, 11, 59 | 61 | 58 | 1 | blaSHV-12, qnrB7 | IncX3 | MQUO00000000 |
a
CDSs, coding sequences; CRISPRs, clustered regularly interspaced short palindromic repeats.