Table 3. MEs in the BNIP3 gene.
Divergence
|
Distance from start of gene
|
Location in ME
|
|||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
% | Del | Ins | Exon | Start | End | ME identification | Start | End | |||
17.6 | 8.0 | 3.2 | 824 | 869 | 1 | 875 | + | HERV70 | LTR/ERV1 | 4641 | 5557 |
26.1 | 0.0 | 4.2 | 1241 | 1288 | C | L2 | LINE/L2 | (86) | 3227 | ||
28.3 | 16.3 | 0.0 | 1648 | 1739 | C | MER5A | DNA/MER1_type | (48) | 141 | ||
9.0 | 4.1 | 0.0 | 2208 | 2473 | + | AluSq | SINE/Alu | 1 | 277 | ||
23.7 | 12.6 | 2.1 | 2753 | 2847 | + | L1ME3A | LINE/L1 | 6021 | 6125 | ||
18.0 | 0.0 | 0.0 | 2938 | 3087 | 2937 | 3086 | + | HERV70 | LTR/ERV1 | 6776 | 6925 |
16.2 | 0.0 | 3.7 | 3164 | 3270 | 3169 | 3277 | + | HERV70 | LTR/ERV1 | 6933 | 7037 |
15.8 | 11.4 | 0.0 | 4574 | 4687 | + | FLAM_C | SINE/Alu | 1 | 127 | ||
13.8 | 0.0 | 0.0 | 5334 | 5418 | 5335 | 5421 | + | HERV70 | LTR/ERV1 | 7032 | 7118 |
13.6 | 1.3 | 0.0 | 6093 | 6243 | 6094 | 6247 | + | HERV70 | LTR/ERV1 | 5901 | 6056 |
19.3 | 2.8 | 0.0 | 6691 | 6980 | C | AluJo | SINE/Alu | (14) | 298 | ||
32.0 | 8.0 | 0.0 | 6997 | 7146 | C | L1ME | LINE/L1 | (734) | 5436 | ||
7.0 | 1.1 | 1.1 | None | 7147 | 7233 | + | HERV70 | LTR/ERV1 | 7172 | 7258 | |
27.5 | 5.6 | 1.4 | 7241 | 7384 | C | L1ME | LINE/L1 | (873) | 5273 | ||
23.0 | 18.6 | 2.3 | 8613 | 8870 | C | MER21C | LTR/ERV1 | (88) | 847 | ||
17.9 | 0.0 | 11.8 | 8909 | 8984 | + | (CCCCAA) n | Simple_repeat | 2 | 68 | ||
16.7 | 0.0 | 1.6 | 9224 | 9284 | + | MER41B | LTR/ERV1 | 481 | 540 | ||
8.3 | 1.4 | 0.7 | 9297 | 9586 | + | AluSq | SINE/Alu | 6 | 297 | ||
24.1 | 3.7 | 3.7 | 9594 | 9675 | C | MER21C | LTR/ERV1 | (853) | 82 | ||
23.7 | 17.2 | 0.0 | 9747 | 10036 | C | MLT1A0 | LTR/MaLR | (17) | 348 | ||
34.9 | 1.8 | 3.6 | 11487 | 11596 | + | MIR3 | SINE/MIR | 101 | 208 | ||
21.7 | 4.7 | 3.5 | 11902 | 11987 | + | FRAM | SINE/Alu | 75 | 161 | ||
4.7 | 3.0 | 3.0 | 12762 | 12892 | + | AluJo/FLAM | SINE/Alu | 1 | 131 | ||
14061 | 14106 | + | HERV70 | LTR/ERV1 | 6053 | 6100 |
Del, deletion; Ins, insertion.