Table 1.
Distance to genes or TSS | Integration frequency (%) of the reference set (n=1,000,000) | Integration frequency (%) of the target set (n=874) | P value |
---|---|---|---|
Within genes | 44.61 (446080) | 49.77 (435) | 0.002** |
Introns | 42.12 (421233) | 46.80 (409) | 0.005** |
Exons | 2.48 (24847) | 2.97 (26) | 0.352 |
Within +5 kb of TSS | 6.18 (61849) | 8.01 (70) | 0.025* |
Within −5 kb of TSS | 4.24 (42405) | 5.03 (44) | 0.244 |
Within ±5 kb of TSS | 10.43 (104254) | 13.04 (114) | 0.011* |
Within +50 kb of TSS | 44.61 (446080) | 49.77 (435) | 0.002** |
Within −50 kb of TSS | 25.22 (252156) | 33.98 (297) | 0.000** |
Within ±50 kb of TSS | 69.82 (698236) | 83.75 (732) | 0.000** |
Within +5 kb ~ +50 kb of TSS | 38.42 (384231) | 41.76 (365) | 0.042* |
Within −5 kb ~ −50 kb of TSS | 20.98 (209751) | 28.95 (253) | 0.000** |
Different distances to the transcriptional start sites (TSS);
‘+’ – downstream of TSS, ‘−’ – upstream of TSS.
Represented a significant difference (P<0.05) for the χ2 test as compared with the reference set.
Represented a significant difference (P<0.01) for the χ2 test as compared to the reference set.