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. 2016 Nov 5;7(49):81541–81554. doi: 10.18632/oncotarget.13132

Table 1. Comparative sequence analysis of the TRPV1 5'UTR variants.

TRPV1v3 |ref|NM_080706.3| CTGCCGCTCACCCTATTCCAGGGACA-CAGTCTGCTTGGCTCTTCTGGAC 49
TRPV1v4 |ref|NM_080705.3| -----------------------GCA-GAGTGTGC--AG----TATAGAT 20
TRPV1v1 |ref|NM_080704.3| ----------------------GGCTCAGGCAGGCCTGG----CCCAGAG 24
TRPV1v0 |ref|NM_018727.5| -----------------------GCCCGGG--------A----CCC---- 11
gi|117306163|ref|NM_080706.3| TGAGCCATCCTCATCACCGAGATCCTCCCTGAATTCAGCCCACGACAGCC 99
gi|117306162|ref|NM_080705.3| TCAGCGTTTGTCG--ACTGA--------CTGAATG------ATAGCA-CA 53
gi|117306161|ref|NM_080704.3| TCA-CGCTGGCAACCAC-GAG------TTTGGGAA------GCAGTCGTA 60
gi|117306160|ref|NM_018727.5| -CA-CGGAGGCG------------------GGGAG------AC------- 28
gi|117306163|ref|NM_080706.3| ACCCCGGCCGTTTTCCTTGTTCTGTGTGGGGAGGGAGGCAGCGCGGTGGT 149
gi|117306162|ref|NM_080705.3| ATCCCGGCTGCTTCC--TGTT----------------------------- 72
gi|117306161|ref|NM_080704.3| TTCTCTCTCTCTCTCTCTCTC----------------------------- 81
gi|117306160|ref|NM_018727.5| ----CACTCT---------------------------------------- 34
gi|117306163|ref|NM_080706.3| TATCAACCTCACCCTGCAGAGGAGGCACCTGAGGCCCAGAGACGAGGAGG 199
gi|117306162|ref|NM_080705.3| -------------------------------------------------G 73
gi|117306161|ref|NM_080704.3| ----------------------------------------------TCTC 85
gi|117306160|ref|NM_018727.5| ----------------------------------------------TCTC 38
gi|117306163|ref|NM_080706.3| GATGGGTCTAACCCAGAACCACAGATGGC-TCTGAGCCGGGGGCCTGTCC 248
gi|117306162|ref|NM_080705.3| GCTGGGTTT-----------------GGT-T------------------- 86
gi|117306161|ref|NM_080704.3| TCTCAGTATCCATGA----------CAGTGTGAT---------------- 109
gi|117306160|ref|NM_018727.5| CCACACGAGCC--------------CAG---------------------- 52
gi|117306163|ref|NM_080706.3| ACCCTCCCAGGCCGACGTCAGTGGCCGCAGGA------CTGCCTGGGCCC 292
gi|117306162|ref|NM_080705.3| -----------------------------GGA------CTG---GGACCC 98
gi|117306161|ref|NM_080704.3| -----------------------------GGAGAGTCTCTGCC-GTGCC- 128
gi|117306160|ref|NM_018727.5| ------------------------------------CTCTCCC------- 59
gi|117306163|ref|NM_080706.3| TGCTAGGCCTGCTCACCTCTGAGGCCTCTGGGGTGAGAGGTTCAGTCCTG 342
gi|117306162|ref|NM_080705.3| --------------------------------GTCAGAGG---------- 106
gi|117306161|ref|NM_080704.3| --------------------------------ATCTGGGATGC------- 139
gi|117306160|ref|NM_018727.5| ---------------------------------TTCGAGTAGC------- 69
gi|117306163|ref|NM_080706.3| GAAACACTTCAGTTCTAGGGGGCTGGGGGC----AGCAGCAAGTTGGAGT 388
gi|117306162|ref|NM_080705.3| AAAA-----------------------GGC----AAC------------- 116
gi|117306161|ref|NM_080704.3| AAACCGTCCCTGTGTTCCCCACGTCCAGGCCGTAGAT------------- 176
gi|117306160|ref|NM_018727.5| AA----------------CCGCCTTCAAGC-------------------- 83
gi|117306163|ref|NM_080706.3| TTTGGGGTACCCTGCTTCACAGGGC----CCTTGGCAAGGAGGGCAGGTG 434
gi|117306162|ref|NM_080705.3| -----------------------GC----CGCTGACAAAGAACATTGCCG 139
gi|117306161|ref|NM_080704.3| -----------------------GCTCCCCGCCGGTCAGTCACTTAGTCG 203
gi|117306160|ref|NM_018727.5| ---------------------------------------TCAC------- 87
gi|117306163|ref|NM_080706.3| GGGTCTAAGGACAAGCAGTCCTTAC---TTTGGGAGT---CAACCCCGGC 478
gi|117306162|ref|NM_080705.3| A-----AAGG----------TTCA------TGGGAG------GCTCCGGC 162
gi|117306161|ref|NM_080704.3| T-----CAGATCG-------CCCGT---CCTGGTATCACAGTGCTTCTGT 238
gi|117306160|ref|NM_018727.5| --------AAGCA-------CCCGTGGGCCTGGGGT----GTGCCTGCGT 118
gi|117306163|ref|NM_080706.3| GTGGTGGCTGCTGCAG---GTTGCACACTGGGCCACAGAGGATCCAGCAA 525
gi|117306162|ref|NM_080705.3| ----------TAACAG---GTTGCACACTGGGCCACAGAGGATCCAGCAA 199
gi|117306161|ref|NM_080704.3| ------------TCAG---GTTGCACACTGGGCCACAGAGGATCCAGCAA 273
gi|117306160|ref|NM_018727.5| ------------CTAGCTGGTTGCACACTGGGCCACAGAGGATCCAGCAA 156
gi|117306163|ref|NM_080706.3| GGATGAAGAAATGGAGCAGCACAGACTTGGGGGCAGCTGCGGACCCACTC 575
gi|117306162|ref|NM_080705.3| GGATGAAGAAATGGAGCAGCACAGACTTGGGGGCAGCTGCGGACCCACTC 249
gi|117306161|ref|NM_080704.3| GGATGAAGAAATGGAGCAGCACAGACTTGGGGGCAGCTGCGGACCCACTC 323
gi|117306160|ref|NM_018727.5| GGATGAAGAAATGGAGCAGCACAGACTTGGGGGCAGCTGCGGACCCACTC 206

Gene bank accession number (gi and NM_) are indicated.