Table 1.
Phage | Host | Phage taxonomy | Virion size (nm) | Genome length (nt) | No. of CDSs | No. of tRNA | Sample materials | References | |
---|---|---|---|---|---|---|---|---|---|
Head | Tail length | ||||||||
G | Bacillus megaterium | Myoviridae | 160 | 453 | 497,513 | 675 | 20 | NAa | Donelli et al., 1975 |
vs. | Cronobacter sakazakii | Myoviridae | 115 | 118 | 358,663 | 545 | 26 | Wastewater | Abbasifar et al., 2014 |
121Q | Escherichia coli | Myoviridae | 116 | 115 | 348,532 | 611 | 7 | Sewage | Ackermann and Nguyen, 1983 |
PBECO 4 | Escherichia coli | Myoviridae | 132 | 125 | 348,113 | 551 | 6 | River water | Kim et al., 2013 |
K64-1 | Klebsiella pneumoniae | Myoviridae | NA | NA | 346,602 | 64 | NA | NA | Pan et al., 2015 |
vB_KleM-RaK2 | Klebsiella sp. | Myoviridae | 123 | 128 | 345,809 | 534 | 5 | NA | Simoliunas et al., 2013 |
201ϕ2-1 | Pseudomonas chlororaphis | Myoviridae | 129 | 200 | 316,674 | 461 | 1 | Soil | Thomas et al., 2008 |
phiPA3 | Pseudomonas aeruginosa | Myoviridae | 100 | 185 | 309,208 | 379 | 5 | Sewage | Monson et al., 2011 |
OBP | Pseudomonas fluorescens | Myoviridae | 119 | 191 | 284,757 | 309 | 4 | Compost | Cornelissen et al., 2012 |
Lu11 | Pseudomonas putida | Myoviridae | 124 | 200 | 280,538 | 391 | 0 | Soil | Adriaenssens et al., 2012 |
ϕKZ | Pseudomonas aeruginosa | Myoviridae | 120 | NA | 280,334 | 306 | 6 | Sewage | Mesyanzhinov et al., 2002 |
CcrColossus | Caulobacter crescentus | Myoviridae | 292 × 95 | 65 | 279,967 | 448 | 28 | Surface water | Meczker et al., 2014 |
KTN4 | Pseudomonas aeruginosa | Myoviridae | 130 | 168 | 279,593 | 368 | NA | Irrigated fields | KT895374 |
vB_EamM_Special G | Erwinia amylovora | Myoviridae | NA | NA | 273,224 | 324 | 0 | Branches and Blossums | KU886222.1 |
vB_EamM_Simmy50 | Erwinia amylovora | Myoviridae | NA | NA | 271,088 | 321 | 1 | Bark | KU886223.1 |
Ea35-70 | Erwinia amylovora | Myoviridae | NA | NA | 271,084 | 318 | 1 | Soil | Yagubi et al., 2014 |
PA7 | Pseudomonas aeruginosa | Myoviridae | NA | NA | 266,743 | 341 | NA | Mudflat | JX233784.1 |
ϕR1-37 | Yersinia enterocolitica | Myoviridae | 138 | 383 | 262,391 | 367 | 5 | Sewage | Kiljunen et al., 2005 |
PaBG | Pseudomonas aeruginosa | Myoviridae | 136 | 220 | 258,139 | 308 | NA | Lake water | Sykilinda et al., 2014 |
vB_BpuM_BpSp | Bacillus pumilus | Myoviridae | 137 | 192 | 255,569 | 318 | 0 | Soil | KT895374 |
P-SSM2 | Prochlorococcus | Myoviridae | 115 | 123 | 252,401 | 334 | 1 | Seawater | Sullivan et al., 2005 |
AR9 | Bacillus subtilis | Myoviridae | NA | NA | 251,042 | 292 | 1 | NA | Lavysh et al., 2016 |
ValKK3 | Vibrio alginolyticus | Myoviridae | NA | NA | 248,088 | 390 | NA | Marine sediment | KP671755b |
nt-1 | Vibrio natriegens | Myoviridae | NA | NA | 247,489 | 379 | 28 | Marine-sediment | Comeau et al., 2014 |
VH7D | Vibrio harveyi | Myoviridae | NA | NA | 246,964 | 327 | NA | Seawater | NC_023568 |
ϕpp2 | Vibrio parahaemolyticus | Myoviridae | 90 × 50 | 110 | 246,421 | 383 | 30 | Aquaculture waterway | Lin and Lin, 2012 |
KVP40 | Vibrio parahaemolyticus | Myoviridae | 140 × 70 | NA | 244,834 | 381 | 30 | Marine-sediment | Miller et al., 2003 |
ϕEaH2 | Erwinia amylovora | Siphoviridae | NA | NA | 243,050 | 262 | NA | Soil | Domotor et al., 2012 |
SPN3US | Salmonella enterica | Myoviridae | NA | NA | 240,413 | 264 | 2 | Chicken feces | Lee et al., 2011 |
VP4B | Vibrio harveyi | Myoviridae | NA | NA | 236,053 | 212 | NA | Ocean | KC131130.1 |
65 | Aeromonas salmonicida | Myoviridae | NA | NA | 235,229 | 437 | 16 | NA | Petrov et al., 2010 |
vB_AbaM_ME3 | Acinetobacter baumanni | Myoviridae | NA | NA | 234,900 | 326 | 4 | Wastewater | Buttimer et al., 2016 |
Aeh1 | Aeromonas hydrophila | Myoviridae | NA | NA | 233,234 | 352 | 27 | NA | NC_005260 |
S-SSM7 | Synechococcus | Myoviridae | NA | NA | 232,878 | 319 | 5 | Seawater | Sullivan et al., 2010 |
CC2 | Aeromonas hydrophila | Myoviridae | NA | NA | 231,743 | 427 | 9 | Sewage | Shen et al., 2012 |
RSL1 | Ralstonia solanacearum | Myoviridae | 150 | 138 | 231,255 | 343 | 3 | Soil | Yamada et al., 2010 |
ACG-2014fc | Synechococcus | Myoviridae | NA | NA | 228,143 | 292 | NA | NA | NC_026927 |
ϕAS5 | Aeromonas salmonicida | Myoviridae | 121 × 71 | 98 | 225,268 | 343 | 24 | River water | Kim et al., 2012 |
CR5 | Cronobacter sakazakii | Myoviridae | NA | NA | 223,989 | 231 | NA | NA | NC_021531 |
RSL2 | Ralstonia solanacearum | Myoviridae | NA | NA | 223,932 | 224 | NA | NA | Bhunchoth et al., 2016 |
CcrRogue | Caulobacter crescentus | Siphoviridae | 205 × 60 | 319 | 223,720 | 350 | 23 | surface water | Meczker et al., 2014 |
RSF1 | Ralstonia solanacearum | Myoviridae | NA | NA | 222,888 | 230 | NA | NA | Bhunchoth et al., 2016 |
PX29 | Aeromonas salmonicida | Myoviridae | NA | NA | 222,006 | 330 | 25 | NA | Petrov et al., 2010 |
CcrKarma | Caulobacter crescentus | Siphoviridae | 205 × 61 | 314 | 221,828 | 353 | 26 | Surface water | Meczker et al., 2014 |
PAU | Sphingomonas paucimobilis | Myoviridae | NA | NA | 219,372 | 295 | 7 | Silkworms | NC_019521 |
CcrSwift | Caulobacter crescentus | Siphoviridae | 219 × 63 | 295 | 219,216 | 343 | 27 | surface water | Meczker et al., 2014 |
0305Φ8-36 | Bacillus thuringiensis | Myoviridae | 95 | 486 | 218,948 | 246 | 0 | NA | Serwer et al., 2007 |
CcrMagneto | Caulobacter crescentus | Siphoviridae | 211 × 58 | 293 | 218,929 | 347 | 27 | Surface water | Meczker et al., 2014 |
ΦEaH1 | Erwinia amylovora | Siphoviridae | NA | NA | 218,339 | 241 | NA | Aerial tissue | Meczker et al., 2014 |
ΦCbK | Caulobacter crescentus | Siphoviridae | 205 × 56 | 300 | 215,710 | 338 | 26 | Surface water | Meczker et al., 2014 |
EL | Pseudomonas aeruginosa | Myoviridae | 140 | 200 | 211,215 | 201 | NA | NA | Hertveldt et al., 2005 |
S-SKS1 | Synechococcus | Siphoviridae | NA | NA | 208,007 | 281 | 11 | Seawater | NC_020851 |
NA indicated the data is not available;
The GenBank accession numbers of the not published phage genomes;
Forty-two isolates of phage ACG-2014f are isolated and only the information of the isolate Syn7803C90 is shown as represent.