Table 2.

The InDel primer sequences used in this study

Primer name	Physical distance (bp) (02-12)	Forward primer sequence (5’-3’)	Reverse primer sequence (3’-5’)
BoID4673	C09:4123400	GAATCGAGACAGAACCGTAT	TAACGTTAACCGGATTGG
BoID4677	C09:4347473	TTAGCGTTTGTGTATTACCG	AAAGAACACAGAGGTTTGGA
BoID4697	C09:5350367	GGCTTTCTATCTGTCAAAAGG	GTTGGAGATTTTCTATCCGA
BoID4704	C09:5830712	TAATATTTGCGAGTGGAAGC	ATCCAGAACCGTCAATCTAA
BoID4707	C09:5940678	GTTTCACCCTTTGATCCTTT	TTCGCACCTTATCAAGTAGAG
M1	C09:5943643	TTGAGCTGCTTCCTTTAGTC	ACAGGAGTGGCATTTACATC
M15	C09:6139366	CTTACACGAACCTTCTCTCG	GGCCTGCATATAAACCTCTT
M17	C09:6312350	GAGGAGTCTACATGCGTTTC	TTGAGGGTAAAGTAGACGGA
BoID4714	C09:6592994	GCCTTAGCATCCAGAGATTA	ACGTCACAACGCTAATTACA
BoID4717	C09:7100587	TCCTGGATACGAAGTACCTG	TCCTAGAAACTTGTTGTCGC
BoID4794	C09:13019067	CATACTTGGAAGGAGCTTTG	CTCACAGTTTCTCCTTTTGG
BoID4798	C09:13119313	CGGATTAACACAGTGAAGAAG	AGATTTTGACCTTAGAAGCG
BoID4805	C09:13318893	ATATCGTCTGGCCCTCTATT	AGAACCCACAGAGACATCAC
BoID4814	C09:14085188	CCTTGGGATTTACAAGGTACT	GAGTAATCGAGAATTATGAGCC
BoID4837	C09:18142750	TGATACCTTTTGTCGAGCTT	ATTTGGGGTTGGTAGAAATC
BoID4863	C09:20025875	AGCAGTGCATGATACAAATG	CGGGCTGTCTAAATCATTA
Primer name	Physical distance (bp) (TO1000)	Forward primer sequence (5’-3’)	Reverse primer sequence (3’-5’)
BRID399	C09:10788227	GGTTGGATTTAGATTTGCTG	CTCCACCGTCATTGTATCAT
BRID471	C09:16850910	TCTAAAAGGAGAAGCCAGAA	GAGGGGAGATGAGGTTTACT
BRID472	C09:16879357	GTTTGAGTTTGTTTTGGGAG	GACTTGTAGCATTTGTCGTG
BRID482	C09:17010450	CATGCATTGAAAGTGTTGTC	AACTGAGCTTTCACACTGGT
BRID485	C09:17102497	CTTCTTGGAGGTCTCTTGTG	TGCACATTAAAACGGTAGG
BRID490	C09:17147250	TACTTGCATCAAATGTTGGG	GCACAGACTCATCTCCTTTC
BRID493	C09:17167025	AGCACTGAGACTACCCTTGA	CAGCTTTGTCTTGTGTCTGA
BRID494	C09:17205726	CGCCATATGAATAAAGGAAC	ACGAAGTCAACAAACAGCTT
BRID499	C09:17500985	ATGCGATGATGAGATAGCTT	AGATCCACTTCAATCCAATG
BRID505	C09:17643567	AACACATATTCCCGTCAAAC	GGAAAAGTGTGTTTTTGGG
BRID517	C09:17879063	AAATCATCCAAACCACTGTC	GTGCCTCTACTAGTTTTGGG
BRID530	C09:18485633	TTCAAGACTCTCCAGCTCAT	CAAGAGAAAGACTGGTTCGT